RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 SIT1Q9Y3P8 196 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 TELO2Q9Y4R8 837 aa7.72□□□□□ -1.17
UBR1-208ENST00000569066 SLC12A8A0AV02 714 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 MED26O95402 600 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 ERVFC1P60507 584 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 GPR19Q15760 415 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 HABP4Q5JVS0 413 aaKnown RBP7.71□□□□□ -1.17
UBR1-208ENST00000569066 PRSS36Q5K4E3 855 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 HHIPL2Q6UWX4 724 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 C14orf80Q86SX3 495 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 EFHBQ8N7U6 833 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 KIAA1958Q8N8K9 716 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 CDH19Q9H159 772 aa7.71□□□□□ -1.17
UBR1-208ENST00000569066 H2AFYO75367 372 aaKnown RBP7.71□□□□□ -1.18
UBR1-208ENST00000569066 FBXO21O94952 628 aa7.71□□□□□ -1.18
UBR1-208ENST00000569066 KIF11P52732 1056 aa7.71□□□□□ -1.18
UBR1-208ENST00000569066 SCAND1P57086 179 aa7.71□□□□□ -1.18
UBR1-208ENST00000569066 PCBP2Q15366 365 aaKnown RBP eCLIP7.71□□□□□ -1.18
UBR1-208ENST00000569066 INAVAQ3KP66 663 aa7.71□□□□□ -1.18
UBR1-208ENST00000569066 LZTR1Q8N653 840 aa7.71□□□□□ -1.18
UBR1-208ENST00000569066 RHOBTB2Q9BYZ6 727 aa7.71□□□□□ -1.18
UBR1-208ENST00000569066 EPB41L1Q9H4G0 881 aa7.71□□□□□ -1.18
UBR1-208ENST00000569066 C19orf44Q9H6X5 657 aa7.71□□□□□ -1.18
UBR1-208ENST00000569066 TOMM22Q9NS69 142 aa7.71□□□□□ -1.18
UBR1-208ENST00000569066 H7C1D1 291 aa7.7□□□□□ -1.18
UBR1-208ENST00000569066 FZD9O00144 591 aa7.7□□□□□ -1.18
UBR1-208ENST00000569066 DGKIO75912 1065 aa7.7□□□□□ -1.18
UBR1-208ENST00000569066 ESRP1Q6NXG1 681 aaKnown RBP7.7□□□□□ -1.18
UBR1-208ENST00000569066 NFXL1Q6ZNB6 911 aa7.7□□□□□ -1.18
UBR1-208ENST00000569066 TMEM151AQ8N4L1 468 aa7.7□□□□□ -1.18
UBR1-208ENST00000569066 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.7□□□□□ -1.18
UBR1-208ENST00000569066 IP6K2Q9UHH9 426 aa7.7□□□□□ -1.18
UBR1-208ENST00000569066 DSEQ9UL01 958 aa7.7□□□□□ -1.18
UBR1-208ENST00000569066 SRPK3Q9UPE1 567 aa7.7□□□□□ -1.18
UBR1-208ENST00000569066 A0A1W2PQ45 241 aaPredicted RBP7.69□□□□□ -1.18
UBR1-208ENST00000569066 A0A1W2PQY0 241 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 FURINP09958 794 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 TMEM253P0C7T8 217 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 PRKCAP17252 672 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 TRHRP34981 398 aaPredicted RBP7.69□□□□□ -1.18
UBR1-208ENST00000569066 SPIRE1Q08AE8 756 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 NUP43Q8NFH3 380 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 COA3Q9Y2R0 106 aaPredicted RBP7.69□□□□□ -1.18
UBR1-208ENST00000569066 LUC7L2Q9Y383 392 aaKnown RBP7.69□□□□□ -1.18
UBR1-208ENST00000569066 SPO11Q9Y5K1 396 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.69□□□□□ -1.18
UBR1-208ENST00000569066 SLC27A2O14975 620 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 SMAD3P84022 425 aaKnown RBP7.69□□□□□ -1.18
UBR1-208ENST00000569066 OCRLQ01968 901 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 PDCD1Q15116 288 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 TERF2Q15554 542 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 SMAD2Q15796 467 aaKnown RBP7.69□□□□□ -1.18
UBR1-208ENST00000569066 ZNF180Q9UJW8 692 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 TAF6LQ9Y6J9 622 aa7.69□□□□□ -1.18
UBR1-208ENST00000569066 CCDC194A0A1B0GVG4 234 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 PSPNO60542 156 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 ODF1Q14990 250 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 TGFBRAP1Q8WUH2 860 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 FUBP3Q96I24 572 aaKnown RBP eCLIP7.68□□□□□ -1.18
UBR1-208ENST00000569066 SLC6A20Q9NP91 592 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 C19orf73Q9NVV2 129 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 ULK1O75385 1050 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 KLF1Q13351 362 aaPredicted RBP7.68□□□□□ -1.18
UBR1-208ENST00000569066 TPH2Q8IWU9 490 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 CHPFQ8IZ52 775 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 MYO1HQ8N1T3 1032 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 SYTL4Q96C24 671 aaPredicted RBP7.68□□□□□ -1.18
UBR1-208ENST00000569066 PCIF1Q9H4Z3 704 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 ZMAT4Q9H898 229 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 BSDC1Q9NW68 430 aaPredicted RBP7.68□□□□□ -1.18
UBR1-208ENST00000569066 ADGRE2Q9UHX3 823 aa7.68□□□□□ -1.18
UBR1-208ENST00000569066 A0A1W2PQ27 194 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 A0A1W2PQ64 194 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 A0A1W2PQC6 194 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 A0A1W2PQD8 194 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 K7ESF4 209 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 ABLIM3O94929 683 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 KIR2DL1P43626 348 aaPredicted RBP7.67□□□□□ -1.18
UBR1-208ENST00000569066 KIR2DL2P43627 348 aaPredicted RBP7.67□□□□□ -1.18
UBR1-208ENST00000569066 DUSP4Q13115 394 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 TMEM132BQ14DG7 1078 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 ARHGAP44Q17R89 818 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 MROH9Q5TGP6 573 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 PASD1Q8IV76 773 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 SIRT2Q8IXJ6 389 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 UHMK1Q8TAS1 419 aaKnown RBP7.67□□□□□ -1.18
UBR1-208ENST00000569066 PANK1Q8TE04 598 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 C8orf48Q96LL4 319 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 MENTQ9BUN1 341 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 ADAMTS6Q9UKP5 1117 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 SLC5A6Q9Y289 635 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 RASSF10A6NK89 507 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 FAM90A27PA6NNH2 459 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 ZSCAN20P17040 1043 aaPredicted RBP7.67□□□□□ -1.18
UBR1-208ENST00000569066 SDHBP21912 280 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 SESN3P58005 492 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 TCIRG1Q13488 830 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 SLC14A2Q15849 920 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 FIGNQ5HY92 759 aa7.67□□□□□ -1.18
UBR1-208ENST00000569066 STEAP3Q658P3 488 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms