RNA–Protein interactions for RNA: ENST00000568875.1

SNAPC5-208, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

TSL 2

Gene SNAPC5, Length 1,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-208ENST00000568875 CDKL5O76039 1030 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 CDK7P50613 346 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 TLE2Q04725 743 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 FSCN1Q16658 493 aaKnown RBP13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 ARHGEF16Q5VV41 709 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 SYNE3Q6ZMZ3 975 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 LINC00301Q8NCQ3 95 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 GLT1D1Q96MS3 346 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 TRIM5Q9C035 493 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 NAT10Q9H0A0 1025 aaKnown RBP13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 STARD7Q9NQZ5 370 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 PXMP2Q9NR77 195 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 GCOM1H8Y6P7 765 aaPredicted RBP13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 CPLX1O14810 134 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 NR3C2P08235 984 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 POLR2MP0CAP2 368 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 HOXA13P31271 388 aaPredicted RBP13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 MAGEA10P43363 369 aaPredicted RBP13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 ME1P48163 572 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 STXBP2Q15833 593 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 CCDC62Q6P9F0 684 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 CPLX2Q6PUV4 134 aaKnown RBP13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 TMTC3Q6ZXV5 915 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 ANKRD33Q7Z3H0 272 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 SCFD2Q8WU76 684 aa13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 ORC3Q9UBD5 711 aaPredicted RBP13.13□□□□□ -0.31
SNAPC5-208ENST00000568875 GOLGA8BA8MQT2 603 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 NKRFO15226 690 aaKnown RBP eCLIP13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 EIF3JO75822 258 aaKnown RBP13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 ARIH2O95376 493 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 EIF2AK2P19525 551 aaKnown RBP13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 FUT2Q10981 343 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 DHX8Q14562 1220 aaKnown RBP13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 VSIG10LQ86VR7 867 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 CCDC82Q8N4S0 544 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 FSIP1Q8NA03 581 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 UBE2Q2Q8WVN8 375 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 TOX2Q96NM4 488 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 BPIFA3Q9BQP9 254 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 PDCD2LQ9BRP1 358 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 GOLPH3LQ9H4A5 285 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 FAM217BQ9NTX9 383 aaPredicted RBP13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 NAP1L2Q9ULW6 460 aaPredicted RBP13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 PCDHA7Q9UN72 937 aa13.12□□□□□ -0.31
SNAPC5-208ENST00000568875 TRIM43BA6NCK2 446 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 ZBTB43O43298 467 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 CABYRO75952 493 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 TXNP10599 105 aaKnown RBP13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 RCAN1P53805 252 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 TTLL4Q14679 1199 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 PPP2R5BQ15173 497 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 MYSM1Q5VVJ2 828 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 CXCL17Q6UXB2 119 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 SH3RF1Q7Z6J0 888 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 SLC43A3Q8NBI5 491 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 VTI1AQ96AJ9 217 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 TRIM43Q96BQ3 446 aaPredicted RBP13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 PDLIM7Q9NR12 457 aa13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 RBM28Q9NW13 759 aaKnown RBP13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 SEC63Q9UGP8 760 aaKnown RBP13.11□□□□□ -0.31
SNAPC5-208ENST00000568875 A0A1W2PPC1 479 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 hCG_1642624A0A1W2PR95 340 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 ARVCFO00192 962 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 MEIS2O14770 477 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 ZEB2O60315 1214 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 RGS20O76081 388 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 CEBPZQ03701 1054 aaKnown RBP13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 FAAP100Q0VG06 881 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 PGM5Q15124 567 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 STK38Q15208 465 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 SF3A1Q15459 793 aaKnown RBP13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 SEPT14Q6ZU15 432 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 CCDC186Q7Z3E2 898 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 CEP57L1Q8IYX8 460 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 SPC24Q8NBT2 197 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 COPS5Q92905 334 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 TIGD1Q96MW7 591 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 PYCARDQ9ULZ3 195 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 GRIN2DO15399 1336 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 KIAA1217Q5T5P2 1943 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 A0A0U1RQG5 324 aaPredicted RBP13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 A6NJR5 290 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 PIK3CDO00329 1044 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 SPTLC2O15270 562 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 PQBP1O60828 265 aaKnown RBP13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 CMA1P23946 247 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 CDC27P30260 824 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 FXR1P51114 621 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 MDM2Q00987 491 aaPredicted RBP13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 RTN1Q16799 776 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 USP17L6PQ6QN14 398 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 FCHSD1Q86WN1 690 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 DRC7Q8IY82 874 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 OR6J1Q8NGC5 347 aa13.1□□□□□ -0.31
SNAPC5-208ENST00000568875 PRKAG2Q9UGJ0 569 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms