RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 CATSPERGQ6ZRH7 1159 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 RNF180Q86T96 592 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 TEX2Q8IWB9 1127 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 CUL5Q93034 780 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 TNFRSF25Q93038 417 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.79□□□□□ -0.841e-12■□□□□ 9.8
KLHDC4-220ENST00000568338 SCAND2PQ9GZW5 306 aaPredicted RBP9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 EPHX3Q9H6B9 360 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 SLC28A3Q9HAS3 691 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 SLC38A10Q9HBR0 1119 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 XPNPEP3Q9NQH7 507 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 SLC5A4Q9NY91 659 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 NOL7Q9UMY1 257 aaKnown RBP9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 PHF24Q9UPV7 400 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 ABCB11O95342 1321 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 PIEZO1Q92508 2521 aa9.79□□□□□ -0.84
KLHDC4-220ENST00000568338 DOCK3Q8IZD9 2030 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 GRXCR1A8MXD5 290 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 M0R2N6 131 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 VWA5AO00534 786 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 ARHGAP33O14559 1287 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 FIBPO43427 364 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 RARBP10826 455 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 ADORA2AP29274 412 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 KCNQ1P51787 676 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 MRPL12P52815 198 aaKnown RBP9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 OAZ1P54368 228 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 TFF2Q03403 129 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 MCTP2Q6DN12 878 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 KRT25Q7Z3Z0 450 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 REXO1Q8N1G1 1221 aaKnown RBP9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 ATG4CQ96DT6 458 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 CHAMP1Q96JM3 812 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 PSTPIP2Q9H939 334 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 RIC8AQ9NPQ8 531 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 HOXC10Q9NYD6 342 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 CCPG1Q9ULG6 757 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 CNPY2Q9Y2B0 182 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 MRPL11Q9Y3B7 192 aaKnown RBP9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 BDP1A6H8Y1 2624 aa9.78□□□□□ -0.84
KLHDC4-220ENST00000568338 DNAH12Q6ZR08 3092 aa9.77□□□□□ -0.84
KLHDC4-220ENST00000568338 CCDC194A0A1B0GVG4 234 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 A0A1W2PQ45 241 aaPredicted RBP9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 A0A1W2PQY0 241 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 SPDYE16A6NNV3 312 aaPredicted RBP9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 STRNO43815 780 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 TIMP1P01033 207 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 IGHA2P01877 340 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 TRAPPC10P48553 1259 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 PSEN2P49810 448 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 AP3B2Q13367 1082 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 NONOQ15233 471 aaKnown RBP eCLIP9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 PSRC1Q6PGN9 363 aaPredicted RBP9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 PIK3AP1Q6ZUJ8 805 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 TMEM199Q8N511 208 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 MB21D1Q8N884 522 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 TMEM87AQ8NBN3 555 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 SPATA32Q96LK8 384 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 USP28Q96RU2 1077 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 MTIF3Q9H2K0 278 aaKnown RBP9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 NKX2-4Q9H2Z4 354 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 POLR3EQ9NVU0 708 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 RTEL1Q9NZ71 1219 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 BTBD7Q9P203 1132 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 PCDHA6Q9UN73 950 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 ADAMTS5Q9UNA0 930 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 PCDHA8Q9Y5H6 950 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 ZNF536O15090 1300 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 ELP1O95163 1332 aa9.77□□□□□ -0.85
KLHDC4-220ENST00000568338 ATP2A1O14983 1001 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 GPR37L1O60883 481 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 YEATS4O95619 227 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 NASPP49321 788 aaPredicted RBP9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 CLK2P49760 499 aaKnown RBP9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 MRE11P49959 708 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 FAAP100Q0VG06 881 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 TMEM240Q5SV17 173 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 PRAMEF19Q5SWL8 479 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 MFSD5Q6N075 450 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 LBX2Q6XYB7 198 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 ANKRD33Q7Z3H0 272 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 RASGRP4Q8TDF6 673 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 KCNG4Q8TDN1 519 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 HERVK_113Q902F9 699 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 TOX2Q96NM4 488 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 GDPD2Q9HCC8 539 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 RAVER2Q9HCJ3 691 aaKnown RBP9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 STARD7Q9NQZ5 370 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 TFIP11Q9UBB9 837 aaKnown RBP9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 CEP131Q9UPN4 1083 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 MROH7Q68CQ1 1323 aa9.76□□□□□ -0.85
KLHDC4-220ENST00000568338 SMCHD1A6NHR9 2005 aa9.75□□□□□ -0.85
KLHDC4-220ENST00000568338 ZNF236Q9UL36 1845 aa9.75□□□□□ -0.85
KLHDC4-220ENST00000568338 FAM86C2PA6NEL3 165 aa9.75□□□□□ -0.85
KLHDC4-220ENST00000568338 PIK3CDO00329 1044 aa9.75□□□□□ -0.85
KLHDC4-220ENST00000568338 BMP15O95972 392 aa9.75□□□□□ -0.85
KLHDC4-220ENST00000568338 PGK1P00558 417 aa9.75□□□□□ -0.85
KLHDC4-220ENST00000568338 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
KLHDC4-220ENST00000568338 ALAS1P13196 640 aa9.75□□□□□ -0.85
KLHDC4-220ENST00000568338 CEBPZQ03701 1054 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms