RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 USP35Q9P2H5 1018 aa12.1□□□□□ -0.47
NIFKP4-201ENST00000567275 PCDHB4Q9Y5E5 795 aa12.1□□□□□ -0.47
NIFKP4-201ENST00000567275 APPP05067 770 aa12.09□□□□□ -0.47
NIFKP4-201ENST00000567275 GNAT1P11488 350 aa12.09□□□□□ -0.47
NIFKP4-201ENST00000567275 CACNB2Q08289 660 aaPredicted RBP12.09□□□□□ -0.47
NIFKP4-201ENST00000567275 B3GNT8Q7Z7M8 397 aa12.09□□□□□ -0.47
NIFKP4-201ENST00000567275 C1QL4Q86Z23 238 aa12.09□□□□□ -0.47
NIFKP4-201ENST00000567275 DDX11Q96FC9 970 aa12.09□□□□□ -0.47
NIFKP4-201ENST00000567275 PWWP2AQ96N64 755 aa12.09□□□□□ -0.47
NIFKP4-201ENST00000567275 NDOR1Q9UHB4 597 aa12.09□□□□□ -0.47
NIFKP4-201ENST00000567275 RUSC2Q8N2Y8 1516 aa12.09□□□□□ -0.47
NIFKP4-201ENST00000567275 MAPKBP1O60336 1514 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 GUCY1A3Q02108 690 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 SPIRE1Q08AE8 756 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 TCERG1LQ5VWI1 586 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 SMARCC2Q8TAQ2 1214 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 PIP4K2CQ8TBX8 421 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 PIF1Q9H611 641 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 IPPKQ9H8X2 491 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 SLC6A20Q9NP91 592 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 MYOTQ9UBF9 498 aa12.08□□□□□ -0.48
NIFKP4-201ENST00000567275 KIAA0586Q9BVV6 1533 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 TADA3O75528 432 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 AFF3P51826 1226 aaKnown RBP12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 PAK1Q13153 545 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 FZD5Q13467 585 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 OTOP3Q7RTS5 596 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 ZC3H18Q86VM9 953 aaKnown RBP12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 MIB1Q86YT6 1006 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 SMOC1Q9H4F8 434 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 PCDHA8Q9Y5H6 950 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 PMF1-BGLAPU3KQ54 211 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 ABCC10Q5T3U5 1492 aa12.07□□□□□ -0.48
NIFKP4-201ENST00000567275 ZSCAN22P10073 491 aaPredicted RBP12.06□□□□□ -0.48
NIFKP4-201ENST00000567275 COL6A2P12110 1019 aa12.06□□□□□ -0.48
NIFKP4-201ENST00000567275 CYP4F22Q6NT55 531 aa12.06□□□□□ -0.48
NIFKP4-201ENST00000567275 CD300LDQ6UXZ3 194 aa12.06□□□□□ -0.48
NIFKP4-201ENST00000567275 FAM126BQ8IXS8 530 aa12.06□□□□□ -0.48
NIFKP4-201ENST00000567275 PHOSPHO1Q8TCT1 267 aa12.06□□□□□ -0.48
NIFKP4-201ENST00000567275 SH3TC2Q8TF17 1288 aa12.06□□□□□ -0.48
NIFKP4-201ENST00000567275 DACT3Q96B18 629 aaPredicted RBP12.06□□□□□ -0.48
NIFKP4-201ENST00000567275 SFMBT1Q9UHJ3 866 aa12.06□□□□□ -0.48
NIFKP4-201ENST00000567275 KIF27Q86VH2 1401 aa12.05□□□□□ -0.48
NIFKP4-201ENST00000567275 EFCAB14O75071 495 aa12.05□□□□□ -0.48
NIFKP4-201ENST00000567275 CYP2C8P10632 490 aa12.05□□□□□ -0.48
NIFKP4-201ENST00000567275 KRTAP19-4Q3LI73 84 aa12.05□□□□□ -0.48
NIFKP4-201ENST00000567275 LCE3BQ5TA77 95 aa12.05□□□□□ -0.48
NIFKP4-201ENST00000567275 SLC52A2Q9HAB3 445 aa12.05□□□□□ -0.48
NIFKP4-201ENST00000567275 NUB1Q9Y5A7 615 aa12.05□□□□□ -0.48
NIFKP4-201ENST00000567275 PCDHA9Q9Y5H5 950 aa12.05□□□□□ -0.48
NIFKP4-201ENST00000567275 TCRBV5S2A0A599 114 aa12.04□□□□□ -0.48
NIFKP4-201ENST00000567275 ARRDC4Q8NCT1 418 aa12.04□□□□□ -0.48
NIFKP4-201ENST00000567275 NGRNQ9NPE2 291 aaKnown RBP12.04□□□□□ -0.48
NIFKP4-201ENST00000567275 KIF13AQ9H1H9 1805 aa12.03□□□□□ -0.48
NIFKP4-201ENST00000567275 SLC27A2O14975 620 aa12.03□□□□□ -0.48
NIFKP4-201ENST00000567275 CRTAMO95727 393 aa12.03□□□□□ -0.48
NIFKP4-201ENST00000567275 C8BP07358 591 aa12.03□□□□□ -0.48
NIFKP4-201ENST00000567275 TRIM48Q8IWZ4 208 aa12.03□□□□□ -0.48
NIFKP4-201ENST00000567275 MRPL4Q9BYD3 311 aaKnown RBP12.03□□□□□ -0.48
NIFKP4-201ENST00000567275 CUL7Q14999 1698 aa12.03□□□□□ -0.48
NIFKP4-201ENST00000567275 SRGAP2CP0DJJ0 459 aa12.02□□□□□ -0.49
NIFKP4-201ENST00000567275 STAT5AP42229 794 aa12.02□□□□□ -0.49
NIFKP4-201ENST00000567275 SIAH1Q8IUQ4 282 aa12.02□□□□□ -0.49
NIFKP4-201ENST00000567275 ZC3H7AQ8IWR0 971 aaKnown RBP12.02□□□□□ -0.49
NIFKP4-201ENST00000567275 FAM26EQ8N5C1 309 aa12.02□□□□□ -0.49
NIFKP4-201ENST00000567275 PCDH18Q9HCL0 1135 aa12.02□□□□□ -0.49
NIFKP4-201ENST00000567275 DTLQ9NZJ0 730 aa12.02□□□□□ -0.49
NIFKP4-201ENST00000567275 ASH2LQ9UBL3 628 aa12.02□□□□□ -0.49
NIFKP4-201ENST00000567275 ARVCFO00192 962 aa12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 PLA2G1BP04054 148 aaKnown RBP12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 NKX3-2P78367 333 aa12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 ST5P78524 1137 aa12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 PCDH19Q8TAB3 1148 aa12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 FNIP1Q8TF40 1166 aa12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 FBXW5Q969U6 566 aa12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 TOE1Q96GM8 510 aaKnown RBP12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 MAGEB10Q96LZ2 347 aaPredicted RBP12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 NCOA5Q9HCD5 579 aaKnown RBP12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 DSEQ9UL01 958 aa12.01□□□□□ -0.49
NIFKP4-201ENST00000567275 NKRFO15226 690 aaKnown RBP eCLIP12□□□□□ -0.49
NIFKP4-201ENST00000567275 SQSTM1Q13501 440 aa12□□□□□ -0.49
NIFKP4-201ENST00000567275 TRIM61Q5EBN2 209 aa12□□□□□ -0.49
NIFKP4-201ENST00000567275 LCNL1Q6ZST4 164 aa12□□□□□ -0.49
NIFKP4-201ENST00000567275 GSTCDQ8NEC7 633 aa12□□□□□ -0.49
NIFKP4-201ENST00000567275 UHMK1Q8TAS1 419 aaKnown RBP12□□□□□ -0.49
NIFKP4-201ENST00000567275 SLC7A14Q8TBB6 771 aa12□□□□□ -0.49
NIFKP4-201ENST00000567275 KANSL2Q9H9L4 492 aa12□□□□□ -0.49
NIFKP4-201ENST00000567275 CATSPERZQ9NTU4 200 aa12□□□□□ -0.49
NIFKP4-201ENST00000567275 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.99□□□□□ -0.49
NIFKP4-201ENST00000567275 GSTA4O15217 222 aa11.99□□□□□ -0.49
NIFKP4-201ENST00000567275 VMACQ2NL98 169 aa11.99□□□□□ -0.49
NIFKP4-201ENST00000567275 FAM47CQ5HY64 1035 aa11.99□□□□□ -0.49
NIFKP4-201ENST00000567275 ZBTB8AQ96BR9 441 aa11.99□□□□□ -0.49
NIFKP4-201ENST00000567275 NOX5Q96PH1 765 aa11.99□□□□□ -0.49
NIFKP4-201ENST00000567275 ADCY10Q96PN6 1610 aa11.99□□□□□ -0.49
NIFKP4-201ENST00000567275 DIP2BQ9P265 1576 aa11.98□□□□□ -0.49
NIFKP4-201ENST00000567275 PLD2O14939 933 aa11.98□□□□□ -0.49
NIFKP4-201ENST00000567275 PYGMP11217 842 aa11.98□□□□□ -0.49
NIFKP4-201ENST00000567275 HABP4Q5JVS0 413 aaKnown RBP11.98□□□□□ -0.49
NIFKP4-201ENST00000567275 RBM12BQ8IXT5 1001 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms