RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 USP17L15C9J2P7 530 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 USP17L13C9JLJ4 530 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 USP17L11C9JVI0 530 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 USP17L18D6R9N7 530 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 USP17L22D6RA61 530 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 USP17L17D6RBQ6 530 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 USP17L19D6RCP7 530 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 USP17L20D6RJB6 530 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 MPHOSPH10O00566 681 aaKnown RBP16.87■□□□□ 0.29
HERC2-207ENST00000564734 PLA2G4BP0C869 781 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 USP17L24Q0WX57 530 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 USP17L6PQ6QN14 398 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 FAM71BQ8TC56 605 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 SYN2Q92777 582 aaPredicted RBP16.87■□□□□ 0.29
HERC2-207ENST00000564734 GLT8D2Q9H1C3 349 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 KCTD10Q9H3F6 313 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 VPS18Q9P253 973 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 FAN1Q9Y2M0 1017 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 SIPA1L1O43166 1804 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 CCNI2Q6ZMN8 369 aaPredicted RBP16.87■□□□□ 0.29
HERC2-207ENST00000564734 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 RNF216Q9NWF9 866 aaPredicted RBP16.87■□□□□ 0.29
HERC2-207ENST00000564734 KIAA1024Q9UPX6 916 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 MYH4Q9Y623 1939 aa16.87■□□□□ 0.29
HERC2-207ENST00000564734 CYP11B2P19099 503 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 SIAH1Q8IUQ4 282 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 TRIM59Q8IWR1 403 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 FLAD1Q8NFF5 587 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 COG1Q8WTW3 980 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 CEP72Q9P209 647 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 NPHP3-ACAD11A0A0J9YXS1 232 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 TRAF5O00463 557 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 AKR1B10O60218 316 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 TLR2O60603 784 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 ERCC3P19447 782 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 MAGEA1P43355 309 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 C2orf54Q08AI8 447 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 MOXD1Q6UVY6 613 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 DCAF4Q8WV16 495 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 SCFD1Q8WVM8 642 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 P2RX7Q99572 595 aaKnown RBP16.86■□□□□ 0.29
HERC2-207ENST00000564734 ANO3Q9BYT9 981 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 DEF6Q9H4E7 631 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 BMP2KQ9NSY1 1161 aaPredicted RBP16.86■□□□□ 0.29
HERC2-207ENST00000564734 NYAP2Q9P242 653 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 NRXN2Q9P2S2 1712 aa16.86■□□□□ 0.29
HERC2-207ENST00000564734 POTEB3A0JP26 581 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 POTECB2RU33 542 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 MEIS2O14770 477 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 SLC12A3P55017 1021 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 SPIRE1Q08AE8 756 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 MAP9Q49MG5 647 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 ARSHQ5FYA8 562 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 MUM1L1Q5H9M0 696 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 POTEBQ6S5H4 581 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 CCDC65Q8IXS2 484 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 CAGE1Q8TC20 777 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 MED4Q9NPJ6 270 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 HPCAL4Q9UM19 191 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 MARCH6O60337 910 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 MED24O75448 989 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 GNA14O95837 355 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 SYF2O95926 243 aaKnown RBP16.85■□□□□ 0.29
HERC2-207ENST00000564734 MYBL2P10244 700 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 EEF2P13639 858 aaKnown RBP16.85■□□□□ 0.29
HERC2-207ENST00000564734 CRKP46108 304 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 GFPT1Q06210 699 aaPredicted RBP16.85■□□□□ 0.29
HERC2-207ENST00000564734 SHROOM1Q2M3G4 852 aaPredicted RBP16.85■□□□□ 0.29
HERC2-207ENST00000564734 ZDHHC15Q96MV8 337 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 PCDHA1Q9Y5I3 950 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 HMGB2P26583 209 aaKnown RBP16.85■□□□□ 0.29
HERC2-207ENST00000564734 NLGN1Q8N2Q7 840 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 ETNPPLQ8TBG4 499 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 OSBPL9Q96SU4 736 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 NUCKS1Q9H1E3 243 aaKnown RBP16.85■□□□□ 0.29
HERC2-207ENST00000564734 TBC1D7Q9P0N9 293 aa16.85■□□□□ 0.29
HERC2-207ENST00000564734 NPR1P16066 1061 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 CDC37Q16543 378 aaPredicted RBP16.84■□□□□ 0.29
HERC2-207ENST00000564734 CCDC40Q4G0X9 1142 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 FAM83BQ5T0W9 1011 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 IQCEQ6IPM2 695 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 GPBP1Q86WP2 473 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 MRIQ9BWK5 157 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 TANGO6Q9C0B7 1094 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 ACBD3Q9H3P7 528 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 PITPNM2Q9BZ72 1349 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 ZMYND10O75800 440 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 STAT3P40763 770 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 CACNA2D4Q7Z3S7 1137 aa16.84■□□□□ 0.29
HERC2-207ENST00000564734 SSBP05455 408 aaKnown RBP eCLIP16.83■□□□□ 0.29
HERC2-207ENST00000564734 TCP1P17987 556 aaKnown RBP16.83■□□□□ 0.29
HERC2-207ENST00000564734 SLC1A4P43007 532 aa16.83■□□□□ 0.29
HERC2-207ENST00000564734 AP3B2Q13367 1082 aa16.83■□□□□ 0.29
HERC2-207ENST00000564734 SH3BP5LQ7L8J4 393 aa16.83■□□□□ 0.29
HERC2-207ENST00000564734 GPIHBP1Q8IV16 184 aa16.83■□□□□ 0.29
HERC2-207ENST00000564734 SLFN12Q8IYM2 578 aa16.83■□□□□ 0.29
HERC2-207ENST00000564734 RNF10Q8N5U6 811 aaKnown RBP16.83■□□□□ 0.29
HERC2-207ENST00000564734 RUBCNQ92622 972 aa16.83■□□□□ 0.29
HERC2-207ENST00000564734 ZBTB9Q96C00 473 aa16.83■□□□□ 0.29
HERC2-207ENST00000564734 UIMC1Q96RL1 719 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms