RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 RBM25P49756 843 aaKnown RBP11.34□□□□□ -0.59
CDH1-206ENST00000564676 ARHGAP4P98171 946 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 SP4Q02446 784 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 MTMR1Q13613 665 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 HSDL1Q3SXM5 330 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 GIMAP8Q8ND71 665 aaPredicted RBP11.34□□□□□ -0.59
CDH1-206ENST00000564676 RASGRP4Q8TDF6 673 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 PPP1R13LQ8WUF5 828 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 BADQ92934 168 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 GTF3C6Q969F1 213 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 AIFM3Q96NN9 605 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 KATNAL1Q9BW62 490 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 TRPV6Q9H1D0 765 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 BCAS3Q9H6U6 928 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 ORC3Q9UBD5 711 aaPredicted RBP11.34□□□□□ -0.59
CDH1-206ENST00000564676 LIMCH1Q9UPQ0 1083 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 STK36Q9NRP7 1315 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 ADAMTS3O15072 1205 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
CDH1-206ENST00000564676 B4GALT4O60513 344 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 DTNBO60941 627 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 ATP9AO75110 1047 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 CTDNEP1O95476 244 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 CD4P01730 458 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 ZNF286BP0CG31 522 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 BMP8BP34820 402 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 PSEN2P49810 448 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 CEP55Q53EZ4 464 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 HABP4Q5JVS0 413 aaKnown RBP11.33□□□□□ -0.6
CDH1-206ENST00000564676 GALNT17Q6IS24 598 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 NFRKBQ6P4R8 1299 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 CYP2W1Q8TAV3 490 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 WASF1Q92558 559 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 KAT2BQ92831 832 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 KIF2CQ99661 725 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 ALG1Q9BT22 464 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 PPP1R12CQ9BZL4 782 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 TBX21Q9UL17 535 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 PCDHA4Q9UN74 947 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 SCN10AQ9Y5Y9 1956 aa11.33□□□□□ -0.6
CDH1-206ENST00000564676 DOCK5Q9H7D0 1870 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 TIMP1P01033 207 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 CYP3A4P08684 503 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 SUPT20HL2P0C7V6 817 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 ARP10275 920 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 HOXD8P13378 290 aaPredicted RBP11.32□□□□□ -0.6
CDH1-206ENST00000564676 KCNA2P16389 499 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 ITGB8P26012 769 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
CDH1-206ENST00000564676 MFSD10Q14728 455 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 RABEP1Q15276 862 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 UTP14CQ5TAP6 766 aaKnown RBP11.32□□□□□ -0.6
CDH1-206ENST00000564676 PLA2G4DQ86XP0 818 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 BLIDQ8IZY5 108 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 FAM177A1Q8N128 213 aaPredicted RBP11.32□□□□□ -0.6
CDH1-206ENST00000564676 ZSCAN31Q96LW9 406 aaPredicted RBP11.32□□□□□ -0.6
CDH1-206ENST00000564676 GPR20Q99678 358 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 SDF4Q9BRK5 362 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 PRO3102Q9H379 93 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 KCNH7Q9NS40 1196 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 TRMT13Q9NUP7 481 aaKnown RBP11.32□□□□□ -0.6
CDH1-206ENST00000564676 KCNJ14Q9UNX9 436 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 NOD1Q9Y239 953 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 TRIOBPQ9H2D6 2365 aa11.32□□□□□ -0.6
CDH1-206ENST00000564676 MEIS1O00470 390 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 F2P00734 622 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 LGALS2P05162 132 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 CYP2C9P11712 490 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 CYP2C18P33260 490 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 KIAA0753Q2KHM9 967 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 NIPA1Q7RTP0 329 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 CCDC83Q8IWF9 413 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 C7orf31Q8N865 590 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 NSUN7Q8NE18 718 aaKnown RBP11.31□□□□□ -0.6
CDH1-206ENST00000564676 SEPT1Q8WYJ6 367 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 HIPK3Q9H422 1215 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 AGO4Q9HCK5 861 aaKnown RBP11.31□□□□□ -0.6
CDH1-206ENST00000564676 JPH1Q9HDC5 661 aaPredicted RBP11.31□□□□□ -0.6
CDH1-206ENST00000564676 HDAC6Q9UBN7 1215 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 TELO2Q9Y4R8 837 aa11.31□□□□□ -0.6
CDH1-206ENST00000564676 A0A1W2PPC1 479 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 FAM86B1E9PN63 330 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 H3BRB1 525 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 HAS3O00219 553 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 ST18O60284 1047 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 JAK2O60674 1132 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 FAM86B2P0C5J1 330 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 FDPSP14324 419 aaKnown RBP11.3□□□□□ -0.6
CDH1-206ENST00000564676 FOSBP53539 338 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 FPGSQ05932 587 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 PTGISQ16647 500 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 PRR16Q569H4 304 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 MFSD5Q6N075 450 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 SESTD1Q86VW0 696 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 TDHQ8IZJ6 230 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 TMEM199Q8N511 208 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 DAGLBQ8NCG7 672 aa11.3□□□□□ -0.6
CDH1-206ENST00000564676 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms