RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	MYOCD	Q8IZQ8	938 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PAGE5	Q96GU1	130 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SYBU	Q9NX95	663 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SMAP	O00193	183 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	BIRC5	O15392	142 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	MFSD4B	Q5TF39	518 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	HDAC7	Q8WUI4	952 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SMG5	Q9UPR3	1016 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	LONP1	P36776	959 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	GUCY1A3	Q02108	690 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	STAT4	Q14765	748 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PALM2	Q8IXS6	379 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	RMI1	Q9H9A7	625 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CCDC162P	A2VCL2	907 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	RAPGEF3	O95398	923 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CTNNA2	P26232	953 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	GSTT1	P30711	240 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SPIDR	Q14159	915 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	GRK7	Q8WTQ7	553 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	LIMA1	Q9UHB6	759 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ANGEL1	Q9UNK9	670 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PCSK2	P16519	638 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SLC34A1	Q06495	639 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ENGASE	Q8NFI3	743 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SIKE1	Q9BRV8	207 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ZMYND12	Q9H0C1	365 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SORCS3	Q9UPU3	1222 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ABCB11	O95342	1321 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	MME	P08473	750 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PGM1	P36871	562 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	TUBA1B	P68363	451 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PDE1C	Q14123	709 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	TUBA1A	Q71U36	451 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CTDP1	Q9Y5B0	961 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ITIH6	Q6UXX5	1313 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	TCP11X1	B4DZS4	312 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	KRT5	P13647	590 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SNX16	P57768	344 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PDIA5	Q14554	519 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	EPM2AIP1	Q7L775	607 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	MAGI3	Q5TCQ9	1506 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	RGS2	P41220	211 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CCDC15	Q0P6D6	951 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	NAB2	Q15742	525 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	C2CD2	Q9Y426	696 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PRR29	P0C7W0	189 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	MTA1	Q13330	715 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	FOXR2	Q6PJQ5	311 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	INPP5D	Q92835	1189 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	TMEM237	Q96Q45	408 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	HECW2	Q9P2P5	1572 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	VWA3A	A6NCI4	1184 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PDCD4	Q53EL6	469 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	TYW1B	Q6NUM6	668 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	TRAPPC11	Q7Z392	1133 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	RSPH3	Q86UC2	560 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	TRPC4AP	Q8TEL6	797 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CFAP36	Q96G28	342 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	GALNT8	Q9NY28	637 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	BTBD11	A6QL63	1104 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SPAG7	O75391	227 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CAPN15	O75808	1086 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	AP1B1	Q10567	949 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	LRRC8B	Q6P9F7	803 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CCDC89	Q8N998	374 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	STK32A	Q8WU08	396 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	TSNARE1	Q96NA8	513 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SAMSN1	Q9NSI8	373 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PI4KAP2	A4QPH2	592 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	FKBP6	O75344	327 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	BCR	P11274	1271 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	KRT13	P13646	458 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	BPIFB4	P59827	614 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	MRPS9	P82933	396 aa	Known RBP	4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	PI4KAP1	Q8N8J0	262 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	CACNA2D1	P54289	1103 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	SLC7A5	Q01650	507 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	NOSTRIN	Q8IVI9	506 aa		4.6	□□□□□ -1.67
MACF1-231	ENST00000564288	P4HA2	O15460	535 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	CD209	Q9NNX6	404 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	CNGB3	Q9NQW8	809 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	ADD3	Q9UEY8	706 aa	Known RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	SSU72P8	A0A1W2PR75	194 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	C16orf96	A6NNT2	1141 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	TRAF5	O00463	557 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	DEXI	O95424	95 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	CLPTM1	O96005	669 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	GSTA3	Q16772	222 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	RBM20	Q5T481	1227 aa	Known RBP	4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	IRGQ	Q8WZA9	623 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	NDE1	Q9NXR1	346 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	LEMD3	Q9Y2U8	911 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	TTI1	O43156	1089 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	SERPINB6	P35237	376 aa		4.59	□□□□□ -1.67
MACF1-231	ENST00000564288	SPTY2D1	Q68D10	685 aa	Predicted RBP	4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms