RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 CCDC113Q9H0I3 377 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 KCNMB3Q9NPA1 279 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 BSDC1Q9NW68 430 aaPredicted RBP13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 SIK3Q9Y2K2 1263 aa13.52□□□□□ -0.24
SCAMP2-204ENST00000563829 A0A0G2JS52 829 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 MINDY4BA8MYZ0 360 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 STXBP3O00186 592 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 RTN3O95197 1032 aaPredicted RBP13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 PYGLP06737 847 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 RARAP10276 462 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 ITIH4Q14624 930 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 VWA3BQ502W6 1294 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 ZC3H12AQ5D1E8 599 aaKnown RBP13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 TMC3Q7Z5M5 1100 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 PIGWQ7Z7B1 504 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 ZSCAN29Q8IWY8 852 aaPredicted RBP13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 TMTC2Q8N394 836 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 PIDD1Q9HB75 910 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 INTS9Q9NV88 658 aaKnown RBP13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 TRIM33Q9UPN9 1127 aa13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 ZNF330Q9Y3S2 320 aaPredicted RBP13.52□□□□□ -0.25
SCAMP2-204ENST00000563829 MYH7P12883 1935 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 C5P01031 1676 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 TNKSO95271 1327 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 AFF2P51816 1311 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 F8VZ95 297 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 ASAP2O43150 1006 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 MYBP10242 640 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 RPS6KA1Q15418 735 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 CWF19L1Q69YN2 538 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 CELF4Q9BZC1 486 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 SPDYE5A6NIY4 337 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 ALADP13716 330 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 ASIC1P78348 528 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 LAMB3Q13751 1172 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 NPY5RQ15761 445 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 PDCD2Q16342 344 aaPredicted RBP13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 TBC1D5Q92609 795 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 TNFRSF25Q93038 417 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 ARHGAP23Q9P227 1491 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 SMIM22K7EJ46 135 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 MAP3K13O43283 966 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 PCCAP05165 728 aaPredicted RBP13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 FERP16591 822 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 LONP1P36776 959 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 ATP11AP98196 1134 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 NAB2Q15742 525 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 RPUSD2Q8IZ73 545 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 SLC17A8Q8NDX2 589 aa13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 UHMK1Q8TAS1 419 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 G3BP2Q9UN86 482 aaKnown RBP13.51□□□□□ -0.25
SCAMP2-204ENST00000563829 KRIT1O00522 736 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 TTI1O43156 1089 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 PCK1P35558 622 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 MSH2P43246 934 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 LACTBP83111 547 aaPredicted RBP13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 ASTE1Q2TB18 679 aaPredicted RBP13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 DNAAF5Q86Y56 855 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 BAP1Q92560 729 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 ADAM22Q9P0K1 906 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 LRRD1A4D1F6 860 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 GSG1L2A8MUP6 293 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 LIN7AO14910 233 aaPredicted RBP13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 ITGA4P13612 1032 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 VEGFAP15692 232 aaPredicted RBP13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 PHKA1P46020 1223 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 TUBP50607 506 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 IFI16Q16666 785 aaKnown RBP13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 SLC5A9Q2M3M2 681 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 TBC1D25Q3MII6 688 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 SLC9C1Q4G0N8 1177 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 HGSNATQ68CP4 663 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 NBPF5PQ86XG9 351 aaPredicted RBP13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 ADAMTS1Q9UHI8 967 aa13.5□□□□□ -0.25
SCAMP2-204ENST00000563829 GOLGA6L10A0A0M3HER8 536 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 PRPF3O43395 683 aaKnown RBP13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 IFI35P80217 286 aaPredicted RBP13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 IFIT5Q13325 482 aaKnown RBP13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 PDXDC1Q6P996 788 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 LDHAL6AQ6ZMR3 332 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 DTHD1Q6ZMT9 781 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 CCDC84Q86UT8 332 aaPredicted RBP13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 RASGRP4Q8TDF6 673 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 TEKT4Q8WW24 435 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 ATXN2LQ8WWM7 1075 aaKnown RBP13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 TMEM59LQ9UK28 342 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 PNMA3Q9UL41 463 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 A0A1B0GVG6 124 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 TCRBV5S4A2TA0A5A2 114 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 NBPF26B4DH59 902 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 RANBP1P43487 201 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 MFN1Q8IWA4 741 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 NBPF15Q8N660 670 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 MIGA1Q8NAN2 632 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 LRRC15Q8TF66 581 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 CENPTQ96BT3 561 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 TLCD1Q96CP7 247 aa13.49□□□□□ -0.25
SCAMP2-204ENST00000563829 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms