RNA–Protein interactions for RNA: ENST00000563484.1

TCF25-210, Transcript of transcription factor 25, human

TSL 2

Gene TCF25, Length 468 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF25-210	ENST00000563484	TOP1MT	Q969P6	601 aa		12.85	□□□□□ -0.35
TCF25-210	ENST00000563484	RMDN3	Q96TC7	470 aa		12.85	□□□□□ -0.35
TCF25-210	ENST00000563484	DDX41	Q9UJV9	622 aa	Known RBP	12.85	□□□□□ -0.35
TCF25-210	ENST00000563484	PNMA2	Q9UL42	364 aa		12.85	□□□□□ -0.35
TCF25-210	ENST00000563484	MRVI1	Q9Y6F6	885 aa		12.85	□□□□□ -0.35
TCF25-210	ENST00000563484	COL4A6	Q14031	1691 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	ORC4	O43929	436 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	MS4A1	P11836	297 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	SMAD4	Q13485	552 aa	Known RBP	12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	STXBP2	Q15833	593 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	CTC1	Q2NKJ3	1217 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	TRIM67	Q6ZTA4	783 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	SERINC5	Q86VE9	423 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	SUGP1	Q8IWZ8	645 aa	Known RBP	12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	NSUN6	Q8TEA1	469 aa	Known RBP	12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	MARVELD3	Q96A59	401 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	UBA5	Q9GZZ9	404 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	PTPRZ1	P23471	2315 aa	Predicted RBP	12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	MYH6	P13533	1939 aa		12.84	□□□□□ -0.35
TCF25-210	ENST00000563484	NCK2	O43639	380 aa		12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	LAMC2	Q13753	1193 aa		12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	CDC37	Q16543	378 aa	Predicted RBP	12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	ARHGEF16	Q5VV41	709 aa		12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	FIBCD1	Q8N539	461 aa		12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	RGS22	Q8NE09	1264 aa		12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	ATP6V0A1	Q93050	837 aa		12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	EMID1	Q96A84	441 aa	Predicted RBP	12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	SPATA33	Q96N06	139 aa		12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	CD207	Q9UJ71	328 aa		12.83	□□□□□ -0.36
TCF25-210	ENST00000563484	C17orf102	A2RUQ5	167 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	SNPH	O15079	494 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	TREH	O43280	583 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	NDUFV1	P49821	464 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	HSDL1	Q3SXM5	330 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	BMP8A	Q7Z5Y6	402 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	OTUD7A	Q8TE49	926 aa	Predicted RBP	12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	IL17RA	Q96F46	866 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	IWS1	Q96ST2	819 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	C11orf84	Q9BUA3	381 aa	Predicted RBP	12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	ANAPC4	Q9UJX5	808 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	CACNA1A	O00555	2505 aa		12.82	□□□□□ -0.36
TCF25-210	ENST00000563484	NR3C2	P08235	984 aa		12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	LINC00271	P0C7V0	271 aa		12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	BMPR1A	P36894	532 aa		12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	VCP	P55072	806 aa	Known RBP	12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	ZXDA	P98168	799 aa		12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	FBXL6	Q8N531	539 aa		12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	PI4K2B	Q8TCG2	481 aa		12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	ZFP91	Q96JP5	570 aa	Predicted RBP	12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	ALG13	Q9NP73	1137 aa	Known RBP	12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	ABCB11	O95342	1321 aa		12.81	□□□□□ -0.36
TCF25-210	ENST00000563484	C5orf67	F2Z3F1	127 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	PPFIA4	O75335	1185 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	EIF3J	O75822	258 aa	Known RBP	12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	RGS20	O76081	388 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	GGPS1	O95749	300 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	FGR	P09769	529 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	SMIM10L2A	P0DMW4	78 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	SMIM10L2B	P0DMW5	78 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	SNHG28	P0DPA3	235 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	MYCL	P12524	364 aa	Predicted RBP	12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	HOXD8	P13378	290 aa	Predicted RBP	12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	HAND2	P61296	217 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	CELF3	Q5SZQ8	465 aa	Known RBP	12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	MYSM1	Q5VVJ2	828 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	ATOH1	Q92858	354 aa	Predicted RBP	12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	PRRX2	Q99811	253 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	C16orf70	Q9BSU1	422 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	LMAN2L	Q9H0V9	348 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	OCEL1	Q9H607	264 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	PXMP2	Q9NR77	195 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	TCP11L1	Q9NUJ3	509 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	ADGRA3	Q8IWK6	1321 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	PLXNA3	P51805	1871 aa		12.8	□□□□□ -0.36
TCF25-210	ENST00000563484	KIAA1671	Q9BY89	1806 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	RIF1	Q5UIP0	2472 aa	Known RBP	12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	CFB	P00751	764 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	RB1	P06400	928 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	UBA1	P22314	1058 aa	Known RBP	12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	ADAM15	Q13444	863 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	QRICH1	Q2TAL8	776 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	GPATCH4	Q5T3I0	446 aa	Known RBP	12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	C20orf194	Q5TEA3	1177 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	ADGRD2	Q7Z7M1	963 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	MCF2L2	Q86YR7	1114 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	ADGRF4	Q8IZF3	695 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	MSLNL	Q96KJ4	702 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	ZKSCAN3	Q9BRR0	538 aa		12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	CHMP4B	Q9H444	224 aa	Known RBP	12.79	□□□□□ -0.36
TCF25-210	ENST00000563484	DOCK5	Q9H7D0	1870 aa		12.78	□□□□□ -0.36
TCF25-210	ENST00000563484	LOC730098	B7Z3J9	87 aa		12.78	□□□□□ -0.36
TCF25-210	ENST00000563484		H3BRB1	525 aa		12.78	□□□□□ -0.36
TCF25-210	ENST00000563484	DHX16	O60231	1041 aa	Known RBP	12.78	□□□□□ -0.36
TCF25-210	ENST00000563484	MMP1	P03956	469 aa		12.78	□□□□□ -0.36
TCF25-210	ENST00000563484	RRP1	P56182	461 aa	Known RBP	12.78	□□□□□ -0.36
TCF25-210	ENST00000563484	SP2	Q02086	613 aa		12.78	□□□□□ -0.36
TCF25-210	ENST00000563484	CAMK1	Q14012	370 aa		12.78	□□□□□ -0.36
TCF25-210	ENST00000563484	BTG3	Q14201	252 aa	Predicted RBP	12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms