RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ZSCAN26Q16670 478 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 SKOR2Q2VWA4 1001 aaPredicted RBP5.34□□□□□ -1.56
SMG1-207ENST00000563235 CAVIN4Q5BKX8 364 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 B3GNT9Q6UX72 402 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 CCDC170Q8IYT3 715 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 USP38Q8NB14 1042 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 RDH13Q8NBN7 331 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 TNIP2Q8NFZ5 429 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.34□□□□□ -1.564e-7■■■■■ 58.1
SMG1-207ENST00000563235 RTF1Q92541 710 aaKnown RBP5.34□□□□□ -1.56
SMG1-207ENST00000563235 EXOC2Q96KP1 924 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 TCEANC2Q96MN5 208 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 PPP1R9BQ96SB3 815 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 PPP1R16BQ96T49 567 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 MED4Q9NPJ6 270 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 KDM5BQ9UGL1 1544 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 ZC3H7BQ9UGR2 993 aaKnown RBP5.34□□□□□ -1.56
SMG1-207ENST00000563235 TLR6Q9Y2C9 796 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 PCDHGC5Q9Y5F6 944 aa5.34□□□□□ -1.56
SMG1-207ENST00000563235 TMEM94Q12767 1356 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 H0Y626 953 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 PAPLNO95428 1278 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 THEGLP0DJG4 465 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 HSPA1AP0DMV8 641 aaKnown RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 HSPA1BP0DMV9 641 aaKnown RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 CKMT1AP12532 417 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 STMN1P16949 149 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 CD9P21926 228 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 LIFRP42702 1097 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 RPIAP49247 311 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 ARFIP1P53367 373 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 C17orf67Q0P5P2 114 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 PDE3AQ14432 1141 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 RABEP1Q15276 862 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 CCDC178Q5BJE1 867 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 PDZD4Q76G19 769 aaPredicted RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 TMEM110Q86TL2 294 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 NLRP13Q86W25 1043 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 DZIP1Q86YF9 867 aaKnown RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 CEP97Q8IW35 865 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 ANKRD35Q8N283 1001 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 ST13P5Q8NFI4 369 aaPredicted RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 TRIM63Q969Q1 353 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 TMEM237Q96Q45 408 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 KIAA1683Q9H0B3 1180 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 TCF7L1Q9HCS4 588 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 FKBPLQ9UIM3 349 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 LRFN2Q9ULH4 789 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 RIMKLBQ9ULI2 386 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 CCDC88BA6NC98 1476 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 H7C0S8 307 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 MAFO75444 373 aaPredicted RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 EPN2O95208 641 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 HNF4AP41235 474 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 YBEYP58557 167 aaPredicted RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 CTAG1AP78358 180 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 ARHGEF6Q15052 776 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 TAF5Q15542 800 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 PDCD2Q16342 344 aaPredicted RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 NXPE4Q6UWF7 544 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 CHST15Q7LFX5 561 aaPredicted RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 RUFY2Q8WXA3 655 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 CFAP36Q96G28 342 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 RMDN2Q96LZ7 410 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 CEP295NLQ96MC4 621 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 WDR24Q96S15 920 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 SLF1Q9BQI6 1058 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 FSD1Q9BTV5 496 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 NT5C1AQ9BXI3 368 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 ARGLU1Q9NWB6 273 aaPredicted RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 BARX2Q9UMQ3 279 aaPredicted RBP5.33□□□□□ -1.56
SMG1-207ENST00000563235 POLHQ9Y253 713 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 TMEM98Q9Y2Y6 226 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 MAP4K5Q9Y4K4 846 aa5.33□□□□□ -1.56
SMG1-207ENST00000563235 CUX1P39880 1505 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 H0YHG0 523 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 ERC2O15083 957 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 SGSM2O43147 1006 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 NEMFO60524 1076 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 AOC2O75106 756 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 LETM1O95202 739 aaPredicted RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 PCP11498 1178 aaKnown RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 PCNAP12004 261 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 ZNF24P17028 368 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 SARNPP82979 210 aaKnown RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 CENPCQ03188 943 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 TRIM28Q13263 835 aaKnown RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 ZNF460Q14592 562 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 SLC30A6Q6NXT4 461 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 PPP1R42Q7Z4L9 355 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 ZNF687Q8N1G0 1237 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 FAM184AQ8NB25 1140 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 PCYOX1LQ8NBM8 494 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMG1-207ENST00000563235 FAM156AQ8NDB6 213 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 GOT1L1Q8NHS2 421 aaPredicted RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 FUBP3Q96I24 572 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMG1-207ENST00000563235 ZNF845Q96IR2 970 aaPredicted RBP5.32□□□□□ -1.56
SMG1-207ENST00000563235 TAAR9Q96RI9 348 aa5.32□□□□□ -1.56
SMG1-207ENST00000563235 MAK16Q9BXY0 300 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms