RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ITGB5P18084 799 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 CYP11B2P19099 503 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 PBX1P40424 430 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 CACNB1Q02641 598 aaPredicted RBP10.49□□□□□ -0.73
LINC00838-201ENST00000562956 GHRHRQ02643 423 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 RAD51AP2Q09MP3 1159 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 ARSHQ5FYA8 562 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 MTERF4Q7Z6M4 381 aaKnown RBP10.49□□□□□ -0.73
LINC00838-201ENST00000562956 GPBP1Q86WP2 473 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 ZNF710Q8N1W2 664 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 SYTL5Q8TDW5 730 aaPredicted RBP10.49□□□□□ -0.73
LINC00838-201ENST00000562956 GTPBP4Q9BZE4 634 aaKnown RBP10.49□□□□□ -0.73
LINC00838-201ENST00000562956 VPS16Q9H269 839 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 RGL1Q9NZL6 768 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 AFG3L2Q9Y4W6 797 aa10.49□□□□□ -0.73
LINC00838-201ENST00000562956 SBF1O95248 1867 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 USP27XA6NNY8 438 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 VGLL3A8MV65 326 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 C19orf81C9J6K1 198 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 COPB1P53618 953 aaKnown RBP10.48□□□□□ -0.73
LINC00838-201ENST00000562956 RPS6P62753 249 aaKnown RBP10.48□□□□□ -0.73
LINC00838-201ENST00000562956 SPAG1Q07617 926 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 COASYQ13057 564 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 PABPC4Q13310 644 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC00838-201ENST00000562956 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.48□□□□□ -0.73
LINC00838-201ENST00000562956 CSGALNACT2Q8N6G5 542 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 TRERF1Q96PN7 1200 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 MXRA8Q9BRK3 442 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 ZNF577Q9BSK1 485 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 THAP9Q9H5L6 903 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 PANK4Q9NVE7 773 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 BICDL2A1A5D9 508 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 N4BP3O15049 544 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 GAS7O60861 476 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 ADKP55263 362 aaKnown RBP10.48□□□□□ -0.73
LINC00838-201ENST00000562956 PPP2R5CQ13362 524 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 VGLL4Q14135 290 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 LRRC41Q15345 812 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 FILIP1LQ4L180 1135 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 REPS2Q8NFH8 660 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 DCPSQ96C86 337 aaKnown RBP10.48□□□□□ -0.73
LINC00838-201ENST00000562956 PURBQ96QR8 312 aaKnown RBP10.48□□□□□ -0.73
LINC00838-201ENST00000562956 TAAR1Q96RJ0 339 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 HSD17B14Q9BPX1 270 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 POLR3CQ9BUI4 534 aaPredicted RBP10.48□□□□□ -0.73
LINC00838-201ENST00000562956 TMX1Q9H3N1 280 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 BMP2KQ9NSY1 1161 aaPredicted RBP10.48□□□□□ -0.73
LINC00838-201ENST00000562956 DNM3Q9UQ16 869 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 SNCAIPQ9Y6H5 919 aa10.48□□□□□ -0.73
LINC00838-201ENST00000562956 DSG3P32926 999 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 PPP1R2P41236 205 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 SETQ01105 290 aaPredicted RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 PSMD2Q13200 908 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 CTTNQ14247 550 aaKnown RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 CEP135Q66GS9 1140 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 CENPPQ6IPU0 288 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 TC2NQ8N9U0 490 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 FGFBP2Q9BYJ0 223 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 WDR11Q9BZH6 1224 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 STK24Q9Y6E0 443 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 IPO5O00410 1097 aaKnown RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 FDX1P10109 184 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 MRPS9P82933 396 aaKnown RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 COG2Q14746 738 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 CATSPERGQ6ZRH7 1159 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 SULF1Q8IWU6 871 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 GUF1Q8N442 669 aaKnown RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 SYT2Q8N9I0 419 aaPredicted RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 ANKRD20A12PQ8NF67 263 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 CNKSR2Q8WXI2 1034 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 UNC45AQ9H3U1 944 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 TMOD4Q9NZQ9 345 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 TBC1D7Q9P0N9 293 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 ADAMTS5Q9UNA0 930 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 PCDHA2Q9Y5H9 948 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 SLITRK3O94933 977 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 EIF2AK2P19525 551 aaKnown RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 EEF1GP26641 437 aaKnown RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 MAP3K9P80192 1104 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 TMEM132BQ14DG7 1078 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 PCNX4Q63HM2 1172 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 SNRNP48Q6IEG0 339 aaKnown RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 NSMFQ6X4W1 530 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 TMEM139Q8IV31 216 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 NOC3LQ8WTT2 800 aaKnown RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 DYDC2Q96IM9 177 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 KCNH7Q9NS40 1196 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 TRMT1Q9NXH9 659 aaKnown RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 PKD2L1Q9P0L9 805 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 ZNF214Q9UL59 606 aaPredicted RBP10.47□□□□□ -0.73
LINC00838-201ENST00000562956 RABGAP1Q9Y3P9 1069 aa10.47□□□□□ -0.73
LINC00838-201ENST00000562956 NKRFO15226 690 aaKnown RBP eCLIP10.46□□□□□ -0.73
LINC00838-201ENST00000562956 RBL2Q08999 1139 aa10.46□□□□□ -0.73
LINC00838-201ENST00000562956 FAM26FQ5R3K3 315 aa10.46□□□□□ -0.73
LINC00838-201ENST00000562956 E4F1Q66K89 784 aaPredicted RBP10.46□□□□□ -0.73
LINC00838-201ENST00000562956 B3GNT9Q6UX72 402 aa10.46□□□□□ -0.73
LINC00838-201ENST00000562956 RNF207Q6ZRF8 634 aa10.46□□□□□ -0.73
LINC00838-201ENST00000562956 KRT26Q7Z3Y9 468 aa10.46□□□□□ -0.73
LINC00838-201ENST00000562956 TPH2Q8IWU9 490 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms