RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 CHP1Q99653 195 aa10.9□□□□□ -0.67
SMG1-205ENST00000561947 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.9□□□□□ -0.67
SMG1-205ENST00000561947 V9GYY5 206 aaPredicted RBP10.9□□□□□ -0.67
SMG1-205ENST00000561947 KRT18P05783 430 aaKnown RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 ZNF280AP59817 542 aaPredicted RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 RASA3Q14644 834 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 TSR1Q2NL82 804 aaKnown RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 SYT2Q8N9I0 419 aaPredicted RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 LRRN4CLQ8ND94 238 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 IQCDQ96DY2 449 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 PCMTD1Q96MG8 357 aaPredicted RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 POLR3CQ9BUI4 534 aaPredicted RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 FGFBP2Q9BYJ0 223 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 EHMT1Q9H9B1 1298 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 CGNQ9P2M7 1197 aaKnown RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 DNM3Q9UQ16 869 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 A0A1W2PQJ5 194 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 PHF20L1A8MW92 1017 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 NFKBIEO00221 500 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 KIF5CO60282 957 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 KIF20AO95235 890 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 PSMC6P62333 389 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 ZBED6P86452 979 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 CACNB1Q02641 598 aaPredicted RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 ELF2Q15723 593 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 MEA1Q16626 185 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 HERC4Q5GLZ8 1057 aaPredicted RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 WDR59Q6PJI9 974 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 CCDC84Q86UT8 332 aaPredicted RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 SLF1Q9BQI6 1058 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 WDR18Q9BV38 432 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 IRX2Q9BZI1 471 aaPredicted RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 NDST4Q9H3R1 872 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 AGPAT5Q9NUQ2 364 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 FBXO28Q9NVF7 368 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 TBC1D7Q9P0N9 293 aa10.89□□□□□ -0.67
SMG1-205ENST00000561947 EPN1Q9Y6I3 576 aaPredicted RBP10.89□□□□□ -0.67
SMG1-205ENST00000561947 MEIS1O00470 390 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 NDUFA10O95299 355 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 RPS12P25398 132 aaKnown RBP10.88□□□□□ -0.67
SMG1-205ENST00000561947 POLD1P28340 1107 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 PTGER2P43116 358 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 FKBP3Q00688 224 aaKnown RBP10.88□□□□□ -0.67
SMG1-205ENST00000561947 PABPC4Q13310 644 aaKnown RBP eCLIP10.88□□□□□ -0.67
SMG1-205ENST00000561947 ARHGAP29Q52LW3 1261 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 LDHDQ86WU2 507 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 FEZ1Q99689 392 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 ZNF341Q9BYN7 854 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 EML1O00423 815 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 ARHGAP25P42331 645 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 RAD51AP2Q09MP3 1159 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 TNFAIP1Q13829 316 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 SAMD1Q6SPF0 538 aaPredicted RBP10.88□□□□□ -0.67
SMG1-205ENST00000561947 KCTD17Q8N5Z5 321 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 MNS1Q8NEH6 495 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 SCFD1Q8WVM8 642 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 CEP63Q96MT8 703 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 TEPSINQ96N21 525 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 EIF2AK1Q9BQI3 630 aaKnown RBP10.88□□□□□ -0.67
SMG1-205ENST00000561947 SIK3Q9Y2K2 1263 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 MRFAP1Q9Y605 127 aa10.88□□□□□ -0.67
SMG1-205ENST00000561947 GIT2Q14161 759 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 SLC5A5Q92911 643 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 CARD6Q9BX69 1037 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 DEFB129Q9H1M3 183 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 KCTD10Q9H3F6 313 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 EMILIN3Q9NT22 766 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 ZNHIT6Q9NWK9 470 aaKnown RBP10.87□□□□□ -0.67
SMG1-205ENST00000561947 SCAF8Q9UPN6 1271 aaKnown RBP10.87□□□□□ -0.67
SMG1-205ENST00000561947 REXO2Q9Y3B8 237 aaKnown RBP10.87□□□□□ -0.67
SMG1-205ENST00000561947 COL4A3BPQ9Y5P4 624 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 TRAF5O00463 557 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 WDR46O15213 610 aaKnown RBP10.87□□□□□ -0.67
SMG1-205ENST00000561947 PSMD10O75832 226 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 EYA4O95677 639 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 EGFRP00533 1210 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 ICAM1P05362 532 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 INPP5BP32019 993 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 CYP4A11Q02928 519 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 PPP2R5CQ13362 524 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 ERCC6LQ2NKX8 1250 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 LRCH2Q5VUJ6 765 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 OTOP1Q7RTM1 612 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 NELFCDQ8IXH7 590 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 ZC3H3Q8IXZ2 948 aaKnown RBP10.87□□□□□ -0.67
SMG1-205ENST00000561947 ZNF397Q8NF99 534 aaPredicted RBP10.87□□□□□ -0.67
SMG1-205ENST00000561947 REEP2Q9BRK0 252 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 MTFR1LQ9H019 292 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 TUFT1Q9NNX1 390 aa10.87□□□□□ -0.67
SMG1-205ENST00000561947 TADA3O75528 432 aa10.86□□□□□ -0.67
SMG1-205ENST00000561947 GNA14O95837 355 aa10.86□□□□□ -0.67
SMG1-205ENST00000561947 UBXN2AP68543 259 aa10.86□□□□□ -0.67
SMG1-205ENST00000561947 CDK17Q00537 523 aa10.86□□□□□ -0.67
SMG1-205ENST00000561947 CCDC40Q4G0X9 1142 aa10.86□□□□□ -0.67
SMG1-205ENST00000561947 CEP55Q53EZ4 464 aa10.86□□□□□ -0.67
SMG1-205ENST00000561947 ZNF569Q5MCW4 686 aa10.86□□□□□ -0.67
SMG1-205ENST00000561947 PPP4R3CPQ6ZMV5 832 aa10.86□□□□□ -0.67
SMG1-205ENST00000561947 LPAR1Q92633 364 aa10.86□□□□□ -0.67
SMG1-205ENST00000561947 CCDC94Q9BW85 323 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms