RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 VPS33BQ9H267 617 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 ADAMTS10Q9H324 1103 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 NSUN3Q9H649 340 aaKnown RBP5.18□□□□□ -1.58
HERC1-211ENST00000560983 SLC52A2Q9HAB3 445 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 CD320Q9NPF0 282 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 POLKQ9UBT6 870 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 CDHR2Q9BYE9 1310 aa5.18□□□□□ -1.58
HERC1-211ENST00000560983 ROCK2O75116 1388 aaKnown RBP5.17□□□□□ -1.58
HERC1-211ENST00000560983 TJP1Q07157 1748 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 SCN11AQ9UI33 1791 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 PRUNE2Q8WUY3 3088 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 RBM47A0AV96 593 aaKnown RBP5.17□□□□□ -1.58
HERC1-211ENST00000560983 YDJCA8MPS7 323 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 UPK3BL1B0FP48 263 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 UPK3BL2E5RIL1 263 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 UBE2Q2LH0YL09 131 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 PPIP5K2O43314 1243 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 RAD17O75943 681 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 STARD3NLO95772 234 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 F13A1P00488 732 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 A1BGP04217 495 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 RAC2P15153 192 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 PLCG1P19174 1290 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 IL6STP40189 918 aaPredicted RBP5.17□□□□□ -1.58
HERC1-211ENST00000560983 PSMD2Q13200 908 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 NR0B2Q15466 257 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 TBC1D10BQ4KMP7 808 aaPredicted RBP5.17□□□□□ -1.58
HERC1-211ENST00000560983 UBE2Q1Q7Z7E8 422 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 CREG2Q8IUH2 290 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 FAM13CQ8NE31 585 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 PDZD8Q8NEN9 1154 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 MYLIPQ8WY64 445 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 JARID2Q92833 1246 aaPredicted RBP5.17□□□□□ -1.58
HERC1-211ENST00000560983 FAM122AQ96E09 287 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 CDCA5Q96FF9 252 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 BCL2L13Q9BXK5 485 aa5.17□□□□□ -1.58
HERC1-211ENST00000560983 POLR3KQ9Y2Y1 108 aaPredicted RBP5.17□□□□□ -1.58
HERC1-211ENST00000560983 ASTN2O75129 1339 aaPredicted RBP5.17□□□□□ -1.58
HERC1-211ENST00000560983 CDH23Q9H251 3354 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 DNAJA2O60884 412 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 PF4P02776 101 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 GLDCP23378 1020 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 YARSP54577 528 aaKnown RBP5.16□□□□□ -1.58
HERC1-211ENST00000560983 FKBP1BP68106 108 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 TNIP1Q15025 636 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 CLEC4GQ6UXB4 293 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 AEBP1Q8IUX7 1158 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 LRRC56Q8IYG6 542 aaPredicted RBP5.16□□□□□ -1.58
HERC1-211ENST00000560983 DPF2Q92785 391 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 DCPSQ96C86 337 aaKnown RBP5.16□□□□□ -1.58
HERC1-211ENST00000560983 TMEM74Q96NL1 305 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 TESK2Q96S53 571 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 DIRC2Q96SL1 478 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 ASPNQ9BXN1 380 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 RTFDC1Q9BY42 306 aaPredicted RBP5.16□□□□□ -1.58
HERC1-211ENST00000560983 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 EPB41L4BQ9H329 900 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 KCNQ5Q9NR82 932 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 GPATCH2Q9NW75 528 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 STAP2Q9UGK3 403 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 DUSP13Q9UII6 198 aa5.16□□□□□ -1.58
HERC1-211ENST00000560983 CACNA1SQ13698 1873 aa5.15□□□□□ -1.58
HERC1-211ENST00000560983 CEP290O15078 2479 aa5.15□□□□□ -1.58
HERC1-211ENST00000560983 BCORQ6W2J9 1755 aa5.15□□□□□ -1.58
HERC1-211ENST00000560983 PRAMEF22A3QJZ6 481 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 TCERG1O14776 1098 aaKnown RBP5.15□□□□□ -1.59
HERC1-211ENST00000560983 LRRN2O75325 713 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 HK2P52789 917 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 SLC4A8Q2Y0W8 1093 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 C1orf141Q5JVX7 400 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 LILRA2Q8N149 483 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 ZSCAN18Q8TBC5 510 aaPredicted RBP5.15□□□□□ -1.59
HERC1-211ENST00000560983 CD99L2Q8TCZ2 262 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 SHISA4Q96DD7 197 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 SNX27Q96L92 541 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 KREMEN1Q96MU8 473 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 FAM161BQ96MY7 647 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 RNF32Q9H0A6 362 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 REV1Q9UBZ9 1251 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 KCNH3Q9ULD8 1083 aa5.15□□□□□ -1.59
HERC1-211ENST00000560983 MRC1P22897 1456 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 KIAA0100Q14667 2235 aaKnown RBP5.14□□□□□ -1.59
HERC1-211ENST00000560983 CHURC1-FNTBB4DL54 471 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 NFIBO00712 420 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 RNMTO43148 476 aaKnown RBP5.14□□□□□ -1.59
HERC1-211ENST00000560983 HTR3BO95264 441 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 TEKQ02763 1124 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 EGR3Q06889 387 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 KIAA2012Q0VF49 1180 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 MPP2Q14168 576 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 LRIT3Q3SXY7 679 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 TIGD5Q53EQ6 642 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 IRF2BP1Q8IU81 584 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 ERO1AQ96HE7 468 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 ZNF496Q96IT1 587 aaPredicted RBP5.14□□□□□ -1.59
HERC1-211ENST00000560983 GUCD1Q96NT3 240 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 CRAMP1Q96RY5 1269 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 G6PC3Q9BUM1 346 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 LRRC3Q9BY71 257 aa5.14□□□□□ -1.59
HERC1-211ENST00000560983 KCNK12Q9HB15 430 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms