RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 GGA3Q9NZ52 723 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 ZNF215Q9UL58 517 aaPredicted RBP15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 CD2APQ9Y5K6 639 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 KDM3AQ9Y4C1 1321 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 RSPH10B2B2RC85 870 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 RSPH10BP0C881 870 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 MAP3K10Q02779 954 aa15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 HERC4Q5GLZ8 1057 aaPredicted RBP15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 UTP14CQ5TAP6 766 aaKnown RBP15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 IRX2Q9BZI1 471 aaPredicted RBP15.68■□□□□ 0.1
CARMIL3-203ENST00000560349 PIK3CDO00329 1044 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 RPS12P25398 132 aaKnown RBP15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 REXO1L1PQ8IX06 675 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 NAP1L4Q99733 375 aaKnown RBP15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 SLF1Q9BQI6 1058 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 NT5C3AQ9H0P0 336 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 BHMT2Q9H2M3 363 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 THAP9Q9H5L6 903 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 EMILIN3Q9NT22 766 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 DNAI1Q9UI46 699 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 ATAD5Q96QE3 1844 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 SFI1A8K8P3 1242 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 LGALS16A8MUM7 142 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 CASP5P51878 434 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 FAM26FQ5R3K3 315 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 LRCH2Q5VUJ6 765 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 FAM160B2Q86V87 743 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 CCDC155Q8N6L0 562 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 MB21D1Q8N884 522 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 EIF2AK1Q9BQI3 630 aaKnown RBP15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 RPAP3Q9H6T3 665 aaPredicted RBP15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 MRPL44Q9H9J2 332 aaKnown RBP15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 SYNPO2Q9UMS6 1093 aa15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 MRPL11Q9Y3B7 192 aaKnown RBP15.67■□□□□ 0.1
CARMIL3-203ENST00000560349 TTC26A0AVF1 554 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 STX10O60499 249 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 KRT9P35527 623 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 SLC12A3P55017 1021 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 HAUS3Q68CZ6 603 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 CCDC125Q86Z20 511 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 TPH2Q8IWU9 490 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 PCMTD1Q96MG8 357 aaPredicted RBP15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 LZTFL1Q9NQ48 299 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 PVALEFA0A1B0GWK0 134 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 BICDL2A1A5D9 508 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 CIITAP33076 1130 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 HIRAP54198 1017 aaPredicted RBP15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 HYIQ5T013 277 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 CENPPQ6IPU0 288 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 MOXD1Q6UVY6 613 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 PRPF38AQ8NAV1 312 aaKnown RBP15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 ACRBPQ8NEB7 543 aa15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 NOC4LQ9BVI4 516 aaKnown RBP15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 CGNQ9P2M7 1197 aaKnown RBP15.66■□□□□ 0.1
CARMIL3-203ENST00000560349 PEX10O60683 326 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 ICAM1P05362 532 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 EEF1GP26641 437 aaKnown RBP15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 HMGCS2P54868 508 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 ERVK-24P63145 666 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 EHHADHQ08426 723 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 ATG4CQ96DT6 458 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 DYDC2Q96IM9 177 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 SH2D3AQ9BRG2 576 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 REEP2Q9BRK0 252 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 RUSC1Q9BVN2 902 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 IKZF4Q9H2S9 585 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 ABHD10Q9NUJ1 306 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 OGFRQ9NZT2 677 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 CTNND1O60716 968 aaKnown RBP15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 ABL1P00519 1130 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 EIF2AK2P19525 551 aaKnown RBP15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 TBC1D8BQ0IIM8 1120 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 CEP55Q53EZ4 464 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 MIIPQ5JXC2 388 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 LRRN4CLQ8ND94 238 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 ZNF507Q8TCN5 953 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 CHP1Q99653 195 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 BMP2KQ9NSY1 1161 aaPredicted RBP15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 AGPAT5Q9NUQ2 364 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 WRAP73Q9P2S5 460 aaPredicted RBP15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 ZHX2Q9Y6X8 837 aa15.65■□□□□ 0.1
CARMIL3-203ENST00000560349 GAS7O60861 476 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 ITGB5P18084 799 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 RPA1P27694 616 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 MYOCDQ8IZQ8 938 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 KIF18AQ8NI77 898 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 ERMNQ8TAM6 284 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 CLEC4DQ8WXI8 215 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 FAM20AQ96MK3 541 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 ZNF577Q9BSK1 485 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 WDR11Q9BZH6 1224 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 KIAA1683Q9H0B3 1180 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 DNM3Q9UQ16 869 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 RIPK3Q9Y572 518 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 WDR46O15213 610 aaKnown RBP15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 CYP3A4P08684 503 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 NSMFQ6X4W1 530 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 OTOP1Q7RTM1 612 aa15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 GUF1Q8N442 669 aaKnown RBP15.64■□□□□ 0.09
CARMIL3-203ENST00000560349 PANX2Q96RD6 677 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms