RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 KRT79Q5XKE5 535 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 SLC30A10Q6XR72 485 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 VSIG10LQ86VR7 867 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 CEP57L1Q8IYX8 460 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 IQUBQ8NA54 791 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 ERMNQ8TAM6 284 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 FAM212AQ96EL1 285 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 CALML4Q96GE6 196 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 CDK5RAP3Q96JB5 506 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 TRIM47Q96LD4 638 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 TIGD1Q96MW7 591 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 CLIC6Q96NY7 704 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 MTMR9Q96QG7 549 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 PDCD2LQ9BRP1 358 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 WDR11Q9BZH6 1224 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 NUP62CLQ9H1M0 184 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 TMEM60Q9H2L4 133 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 TNMDQ9H2S6 317 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 TTC12Q9H892 705 aaPredicted RBP7.25□□□□□ -1.25
SPG11-221ENST00000560299 TXNRD2Q9NNW7 524 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 DACT1Q9NYF0 836 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 LRWD1Q9UFC0 647 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 FRMPD4Q14CM0 1322 aa7.25□□□□□ -1.25
SPG11-221ENST00000560299 MGAMO43451 1857 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 FAM237AA0A1B0GTK4 181 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 POTEB3A0JP26 581 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 FAM86B1E9PN63 330 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 MEIS1O00470 390 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 WNT7AO00755 349 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 TNPO2O14787 897 aaKnown RBP7.24□□□□□ -1.25
SPG11-221ENST00000560299 GAS7O60861 476 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 NR1I2O75469 434 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 EIF3JO75822 258 aaKnown RBP7.24□□□□□ -1.25
SPG11-221ENST00000560299 FAM86B2P0C5J1 330 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 PFKFB1P16118 471 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 LIG1P18858 919 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 NDUFA8P51970 172 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 UBXN2AP68543 259 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 PDE4DQ08499 809 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 MTMR1Q13613 665 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 MAP3K21Q5TCX8 1036 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 LRCH2Q5VUJ6 765 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 OLFML2BQ68BL8 750 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 HAUS3Q68CZ6 603 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 POTEBQ6S5H4 581 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 SHC4Q6S5L8 630 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 PLEKHH3Q7Z736 793 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 DPP9Q86TI2 863 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 FMR1NBQ8N0W7 255 aaPredicted RBP7.24□□□□□ -1.25
SPG11-221ENST00000560299 IGSF22Q8N9C0 903 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 SYMPKQ92797 1274 aaKnown RBP7.24□□□□□ -1.25
SPG11-221ENST00000560299 GPRASP2Q96D09 838 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 RIT2Q99578 217 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 ZNF577Q9BSK1 485 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 CCSER1Q9C0I3 900 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 MCOLN1Q9GZU1 580 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 NT5C3AQ9H0P0 336 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 CUEDC2Q9H467 287 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 KCNMB3Q9NPA1 279 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 JADE2Q9NQC1 790 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 TBC1D22BQ9NU19 505 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 COL20A1Q9P218 1284 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 CPA4Q9UI42 421 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 TRIM17Q9Y577 477 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 UBIAD1Q9Y5Z9 338 aa7.24□□□□□ -1.25
SPG11-221ENST00000560299 ZNFX1Q9P2E3 1918 aaKnown RBP7.23□□□□□ -1.25
SPG11-221ENST00000560299 DNAJC25-GNG10A0A024R161 153 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 IGLV3-22A0A075B6J6 115 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 IPO5O00410 1097 aaKnown RBP7.23□□□□□ -1.25
SPG11-221ENST00000560299 MSH4O15457 936 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 POLR2DO15514 142 aaKnown RBP7.23□□□□□ -1.25
SPG11-221ENST00000560299 RGS2P41220 211 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 STAT6P42226 847 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 ALDH5A1P51649 535 aaPredicted RBP7.23□□□□□ -1.25
SPG11-221ENST00000560299 AMPD3Q01432 767 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 MAP2K5Q13163 448 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 SNW1Q13573 536 aaKnown RBP7.23□□□□□ -1.25
SPG11-221ENST00000560299 SPECC1Q5M775 1068 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 RRAGBQ5VZM2 374 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 KCNV1Q6PIU1 500 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 MAMDC4Q6UXC1 1216 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 GPR142Q7Z601 462 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 CABP7Q86V35 215 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 ELOA2Q8IYF1 753 aaPredicted RBP7.23□□□□□ -1.25
SPG11-221ENST00000560299 TNS4Q8IZW8 715 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 KCTD17Q8N5Z5 321 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 FAM133AQ8N9E0 248 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 GIMAP8Q8ND71 665 aaPredicted RBP7.23□□□□□ -1.25
SPG11-221ENST00000560299 CNNM3Q8NE01 707 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 ENGASEQ8NFI3 743 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 ETNPPLQ8TBG4 499 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 CD99L2Q8TCZ2 262 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 HAS1Q92839 578 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 ABHD8Q96I13 439 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 EPSTI1Q96J88 318 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 ZNF333Q96JL9 665 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 NUDT12Q9BQG2 462 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 TEKT3Q9BXF9 490 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 LRRC27Q9C0I9 530 aa7.23□□□□□ -1.25
SPG11-221ENST00000560299 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms