RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 C16orf70Q9BSU1 422 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 UBA5Q9GZZ9 404 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 LMAN2LQ9H0V9 348 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 CHMP4BQ9H444 224 aaKnown RBP15□□□□□ -0.01
RABGGTA-213ENST00000560127 DCTPP1Q9H773 170 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 CD207Q9UJ71 328 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 ZNF292O60281 2723 aa15□□□□□ -0.01
RABGGTA-213ENST00000560127 TTC41PQ6P2S7 1318 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 SORBS3O60504 671 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 GFRA3O60609 400 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 NR3C2P08235 984 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 BMPR1AP36894 532 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 ZXDAP98168 799 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 ALX1Q15699 326 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 CDC37Q16543 378 aaPredicted RBP14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 ARHGEF16Q5VV41 709 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 FIBCD1Q8N539 461 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 IL17RAQ96F46 866 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 C11orf84Q9BUA3 381 aaPredicted RBP14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 IGFLR1Q9H665 355 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 PXMP2Q9NR77 195 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 FAM86C1Q9NVL1 165 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 PLXNA4Q9HCM2 1894 aa14.99□□□□□ -0.01
RABGGTA-213ENST00000560127 C17orf102A2RUQ5 167 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 TREHO43280 583 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 RGS20O76081 388 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 EYA4O95677 639 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 CTSHP09668 335 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 ADAM15Q13444 863 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 CELF3Q5SZQ8 465 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 SUGP1Q8IWZ8 645 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 FBXL6Q8N531 539 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 MSLNLQ96KJ4 702 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 SPATA33Q96N06 139 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 TTC14Q96N46 770 aa14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 RC3H2Q9HBD1 1191 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-213ENST00000560127 EP300Q09472 2414 aaPredicted RBP14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 LOC730098B7Z3J9 87 aa14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 CAND2O75155 1236 aa14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 CSPG5O95196 566 aa14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 SMIM10L2AP0DMW4 78 aa14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 SMIM10L2BP0DMW5 78 aa14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 SP2Q02086 613 aa14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 CAMK1Q14012 370 aa14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 GPATCH4Q5T3I0 446 aaKnown RBP14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 MCF2L2Q86YR7 1114 aa14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 OTUD7AQ8TE49 926 aaPredicted RBP14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 CLP1Q92989 425 aaKnown RBP14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 CACNA1BQ00975 2339 aa14.97□□□□□ -0.01
RABGGTA-213ENST00000560127 ADGRA3Q8IWK6 1321 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 H3BRB1 525 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 GGPS1O95749 300 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 FGAP02671 866 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 MMP1P03956 469 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 VCPP55072 806 aaKnown RBP14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 FOXK2Q01167 660 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 CBX2Q14781 532 aaPredicted RBP14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 QRICH1Q2TAL8 776 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 APBB2Q92870 758 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 RNPEPQ9H4A4 650 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 TUT1Q9H6E5 874 aaKnown RBP14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 CLEC1BQ9P126 229 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 RWDD3Q9Y3V2 267 aa14.96□□□□□ -0.01
RABGGTA-213ENST00000560127 DMXL1Q9Y485 3027 aa14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 LAMA4Q16363 1823 aa14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 HSPD1P10809 573 aaKnown RBP14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 UBA1P22314 1058 aaKnown RBP14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 NDUFV1P49821 464 aa14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 ADGRF4Q8IZF3 695 aa14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 SMRP1Q8NCR6 262 aa14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 GPKOWQ92917 476 aaPredicted RBP eCLIP14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 PDCD2LQ9BRP1 358 aa14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 MRPL11Q9Y3B7 192 aaKnown RBP14.95□□□□□ -0.02
RABGGTA-213ENST00000560127 OPLAHO14841 1288 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 CFBP00751 764 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 LGALS2P05162 132 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 MYCLP12524 364 aaPredicted RBP14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 DNAJB1P25685 340 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 HSD17B4P51659 736 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 HAND2P61296 217 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 SIGLEC14Q08ET2 396 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 COASYQ13057 564 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 FAM26DQ5JW98 314 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 C20orf194Q5TEA3 1177 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 KCNV1Q6PIU1 500 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 ADGRD2Q7Z7M1 963 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 ASIC4Q96FT7 647 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 BCAS3Q9H6U6 928 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 PLAGL2Q9UPG8 496 aa14.94□□□□□ -0.02
RABGGTA-213ENST00000560127 AVPR2P30518 371 aa14.93□□□□□ -0.02
RABGGTA-213ENST00000560127 GHRHRQ02643 423 aa14.93□□□□□ -0.02
RABGGTA-213ENST00000560127 VSIG10LQ86VR7 867 aa14.93□□□□□ -0.02
RABGGTA-213ENST00000560127 EFHBQ8N7U6 833 aa14.93□□□□□ -0.02
RABGGTA-213ENST00000560127 IL31RAQ8NI17 732 aa14.93□□□□□ -0.02
RABGGTA-213ENST00000560127 ATOH1Q92858 354 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-213ENST00000560127 ZNF689Q96CS4 500 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-213ENST00000560127 ZKSCAN3Q9BRR0 538 aa14.93□□□□□ -0.02
RABGGTA-213ENST00000560127 PLVAPQ9BX97 442 aa14.93□□□□□ -0.02
RABGGTA-213ENST00000560127 SETD4Q9NVD3 440 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms