RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 KATNBL1Q9H079 304 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 PRO3102Q9H379 93 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 MED4Q9NPJ6 270 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 JRKLQ9Y4A0 524 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 ASTN1O14525 1302 aa9.01□□□□□ -0.97
RTF1-205ENST00000558298 DNAH12Q6ZR08 3092 aa9□□□□□ -0.97
RTF1-205ENST00000558298 TCHHQ07283 1943 aa9□□□□□ -0.97
RTF1-205ENST00000558298 GOLGA8AA7E2F4 631 aa9□□□□□ -0.97
RTF1-205ENST00000558298 GOLGA8BA8MQT2 603 aa9□□□□□ -0.97
RTF1-205ENST00000558298 B4DLN1 442 aa9□□□□□ -0.97
RTF1-205ENST00000558298 SEPT4O43236 478 aa9□□□□□ -0.97
RTF1-205ENST00000558298 SMC2O95347 1197 aa9□□□□□ -0.97
RTF1-205ENST00000558298 PLEKHA8P1O95397 391 aa9□□□□□ -0.97
RTF1-205ENST00000558298 PGK2P07205 417 aa9□□□□□ -0.97
RTF1-205ENST00000558298 ATP2B1P20020 1258 aa9□□□□□ -0.97
RTF1-205ENST00000558298 PDIA3P30101 505 aaKnown RBP9□□□□□ -0.97
RTF1-205ENST00000558298 METAP2P50579 478 aaKnown RBP eCLIP9□□□□□ -0.97
RTF1-205ENST00000558298 CLCN6P51797 869 aa9□□□□□ -0.97
RTF1-205ENST00000558298 MRPL12P52815 198 aaKnown RBP9□□□□□ -0.97
RTF1-205ENST00000558298 ETF1P62495 437 aaKnown RBP9□□□□□ -0.97
RTF1-205ENST00000558298 ARHGAP29Q52LW3 1261 aa9□□□□□ -0.97
RTF1-205ENST00000558298 HSP90B2PQ58FF3 399 aa9□□□□□ -0.97
RTF1-205ENST00000558298 WDR78Q5VTH9 848 aa9□□□□□ -0.97
RTF1-205ENST00000558298 RNF207Q6ZRF8 634 aa9□□□□□ -0.97
RTF1-205ENST00000558298 SPATS2Q86XZ4 545 aaKnown RBP9□□□□□ -0.97
RTF1-205ENST00000558298 NUP133Q8WUM0 1156 aa9□□□□□ -0.97
RTF1-205ENST00000558298 CACTINQ8WUQ7 758 aaKnown RBP9□□□□□ -0.97
RTF1-205ENST00000558298 ZFP91Q96JP5 570 aaPredicted RBP9□□□□□ -0.97
RTF1-205ENST00000558298 SPATA32Q96LK8 384 aa9□□□□□ -0.97
RTF1-205ENST00000558298 TCEANC2Q96MN5 208 aa9□□□□□ -0.97
RTF1-205ENST00000558298 IWS1Q96ST2 819 aa9□□□□□ -0.97
RTF1-205ENST00000558298 MPHOSPH6Q99547 160 aaKnown RBP9□□□□□ -0.97
RTF1-205ENST00000558298 MYL10Q9BUA6 226 aa9□□□□□ -0.97
RTF1-205ENST00000558298 LRRC2Q9BYS8 371 aa9□□□□□ -0.97
RTF1-205ENST00000558298 GLT8D2Q9H1C3 349 aa9□□□□□ -0.97
RTF1-205ENST00000558298 ABHD16BQ9H3Z7 469 aa9□□□□□ -0.97
RTF1-205ENST00000558298 ORC3Q9UBD5 711 aaPredicted RBP9□□□□□ -0.97
RTF1-205ENST00000558298 SEC63Q9UGP8 760 aaKnown RBP9□□□□□ -0.97
RTF1-205ENST00000558298 DDX20Q9UHI6 824 aaKnown RBP9□□□□□ -0.97
RTF1-205ENST00000558298 MTMR7Q9Y216 660 aa9□□□□□ -0.97
RTF1-205ENST00000558298 MTMR6Q9Y217 621 aa9□□□□□ -0.97
RTF1-205ENST00000558298 RRP15Q9Y3B9 282 aaKnown RBP9□□□□□ -0.97
RTF1-205ENST00000558298 LTBP2Q14767 1821 aa9□□□□□ -0.97
RTF1-205ENST00000558298 STK36Q9NRP7 1315 aa9□□□□□ -0.97
RTF1-205ENST00000558298 RBM47A0AV96 593 aaKnown RBP8.99□□□□□ -0.97
RTF1-205ENST00000558298 SOWAHBA6NEL2 793 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 STAM2O75886 525 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 CCDC172P0C7W6 258 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 ZNF865P0CJ78 1059 aaPredicted RBP8.99□□□□□ -0.97
RTF1-205ENST00000558298 CST5P28325 142 aaPredicted RBP8.99□□□□□ -0.97
RTF1-205ENST00000558298 CDC27P30260 824 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 ALDH5A1P51649 535 aaPredicted RBP8.99□□□□□ -0.97
RTF1-205ENST00000558298 CCDC73Q6ZRK6 1079 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 ARMCX2Q7L311 632 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 PLCD3Q8N3E9 789 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 SYTL5Q8TDW5 730 aaPredicted RBP8.99□□□□□ -0.97
RTF1-205ENST00000558298 PAWRQ96IZ0 340 aaKnown RBP8.99□□□□□ -0.97
RTF1-205ENST00000558298 PIGSQ96S52 555 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 UPF3BQ9BZI7 483 aaKnown RBP8.99□□□□□ -0.97
RTF1-205ENST00000558298 CPVLQ9H3G5 476 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 VTA1Q9NP79 307 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 PDRG1Q9NUG6 133 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 Q9Y3F1 56 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 CEP83Q9Y592 693 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 PCDHA1Q9Y5I3 950 aa8.99□□□□□ -0.97
RTF1-205ENST00000558298 PRPF3O43395 683 aaKnown RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 PFKFB2O60825 505 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 SNAI1O95863 264 aaPredicted RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 TFRCP02786 760 aaKnown RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 AKR1A1P14550 325 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 CPA1P15085 419 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 TAL1P17542 331 aaPredicted RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 GJB2P29033 226 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 APOBRQ0VD83 1088 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 BAATQ14032 418 aaPredicted RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 SMC1AQ14683 1233 aaKnown RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 PFKFB3Q16875 520 aaPredicted RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 FOXD4L5Q5VV16 416 aaPredicted RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 LARP1BQ659C4 914 aaKnown RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 MCTP2Q6DN12 878 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 XRRA1Q6P2D8 792 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 SAMD1Q6SPF0 538 aaPredicted RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 SLC30A10Q6XR72 485 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 SYT10Q6XYQ8 523 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 MMS22LQ6ZRQ5 1243 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 HDXQ7Z353 690 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 NSUN6Q8TEA1 469 aaKnown RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 FOXD4L4Q8WXT5 416 aaPredicted RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 HTATIP2Q9BUP3 242 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 UPF3AQ9H1J1 476 aaKnown RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 SH3GLB2Q9NR46 395 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 HOMER2Q9NSB8 354 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.98□□□□□ -0.97
RTF1-205ENST00000558298 BARHL2Q9NY43 387 aa8.98□□□□□ -0.97
RTF1-205ENST00000558298 SCN10AQ9Y5Y9 1956 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 A0A087WUV0 522 aaPredicted RBP8.97□□□□□ -0.97
RTF1-205ENST00000558298 TMCO5BA8MYB1 307 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 H0YGN5 161 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 DNM1LO00429 736 aa8.97□□□□□ -0.97
RTF1-205ENST00000558298 NKRFO15226 690 aaKnown RBP eCLIP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms