RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 ANKRD40Q6AI12 368 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 DDX42Q86XP3 938 aaKnown RBP eCLIP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 CCDC63Q8NA47 563 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 RAPGEF5Q92565 580 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 P2RX5Q93086 422 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 MTMR8Q96EF0 704 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 SELENOSQ9BQE4 189 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 BRIP1Q9BX63 1249 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 TTYH3Q9C0H2 523 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 NLRC4Q9NPP4 1024 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 DISC1Q9NRI5 854 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 SPATS2LQ9NUQ6 558 aaKnown RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 SALL4Q9UJQ4 1053 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 GGA2Q9UJY4 613 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 RTL9Q8NET4 1388 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 SPEF2Q9C093 1822 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 SMIM23A6NLE4 172 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 EIF4E1BA6NMX2 242 aaKnown RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 ENO4A6NNW6 628 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 PPIP5K2O43314 1243 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 MAGOHP61326 146 aaKnown RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 PKN1Q16512 942 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 IL17AQ16552 155 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 NBPF9Q3BBW0 867 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 CHADLQ6NUI6 762 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 TTI2Q6NXR4 508 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 DTHD1Q6ZMT9 781 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 ZNF572Q7Z3I7 529 aaPredicted RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 EGFL6Q8IUX8 553 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 CD302Q8IX05 232 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 LCORLQ8N3X6 602 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 ARMC2Q8NEN0 867 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 RNF217Q8TC41 542 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 ESR2Q92731 530 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 CUL5Q93034 780 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 MAGOHBQ96A72 148 aaKnown RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 LRRC45Q96CN5 670 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 MASTLQ96GX5 879 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 GOPCQ9HD26 462 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 L3MBTL1Q9Y468 752 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 GSG1L2A8MUP6 293 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 C6orf229H3BNL8 230 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 NFKBIEO00221 500 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 KCNK3O14649 394 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 EPHB6O15197 1021 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 CTNND1O60716 968 aaKnown RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 KCNA3P22001 575 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 ITGA6P23229 1130 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 ELF3P78545 371 aaPredicted RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 CDC37Q16543 378 aaPredicted RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 AP1ARQ63HQ0 302 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 SYNE4Q8N205 404 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 CCDC155Q8N6L0 562 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 CCDC197Q8NCU1 140 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 MDM1Q8TC05 714 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 LPIN2Q92539 896 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 HPS3Q969F9 1004 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 DHTKD1Q96HY7 919 aaPredicted RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 DUSP9Q99956 384 aaKnown RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 TAF1DQ9H5J8 278 aaPredicted RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 LUC7LQ9NQ29 371 aaKnown RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 RBM28Q9NW13 759 aaKnown RBP5.56□□□□□ -1.52
HMG20A-204ENST00000558288 PLAGL2Q9UPG8 496 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 MTMR7Q9Y216 660 aa5.56□□□□□ -1.52
HMG20A-204ENST00000558288 TLDC2A0PJX2 215 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 RIMBP2O15034 1052 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 PRPF3O43395 683 aaKnown RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 CEP104O60308 925 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 KCNA4P22459 653 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 LONP1P36776 959 aaKnown RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 NIM1KQ8IY84 436 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 MREGQ8N565 214 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 RASGRP4Q8TDF6 673 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 SDR42E1Q8WUS8 393 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 AP1M1Q9BXS5 423 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 TRIM31Q9BZY9 425 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 LRP2BPQ9P2M1 347 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 RNF14Q9UBS8 474 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 CNOT8Q9UFF9 292 aaKnown RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 SWAP70Q9UH65 585 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 HACL1Q9UJ83 578 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 FBXL5Q9UKA1 691 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 DCDC2CA8MYV0 355 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 NKRFO15226 690 aaKnown RBP eCLIP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ANP32DO95626 131 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 PCCAP05165 728 aaPredicted RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 VIMP08670 466 aaKnown RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 UQCRFS1P1P0C7P4 283 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 FCER1AP12319 257 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 CCNE1P24864 410 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 TM4SF1P30408 202 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 HSPA9P38646 679 aaKnown RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 IL6STP40189 918 aaPredicted RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 LBX1P52954 281 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ZNF844Q08AG5 666 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 XRCC4Q13426 336 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 TTLL12Q14166 644 aaPredicted RBP5.55□□□□□ -1.52
HMG20A-204ENST00000558288 ALX1Q15699 326 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 CEP120Q8N960 986 aa5.55□□□□□ -1.52
HMG20A-204ENST00000558288 SPATA5Q8NB90 893 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms