RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 CARD6Q9BX69 1037 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 LUC7LQ9NQ29 371 aaKnown RBP9.24□□□□□ -0.93
SPG11-209ENST00000558253 TMEM260Q9NX78 707 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 PLA2G2EQ9NZK7 142 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 TMOD2Q9NZR1 351 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 FAM184BQ9ULE4 1060 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 MAPK8IP1Q9UQF2 711 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 RABGAP1Q9Y3P9 1069 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 PCDHA1Q9Y5I3 950 aa9.24□□□□□ -0.93
SPG11-209ENST00000558253 ANO9A1A5B4 782 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 CCDC151A5D8V7 595 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 MYMKA6NI61 221 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 B4DLN1 442 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 SLC37A4O43826 429 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 ECE2O60344 883 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 USO1O60763 962 aaKnown RBP9.23□□□□□ -0.93
SPG11-209ENST00000558253 ERLIN1O75477 346 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 TDP2O95551 362 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 CYP3A4P08684 503 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 SCNN1DP51172 638 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 MARSP56192 900 aaKnown RBP9.23□□□□□ -0.93
SPG11-209ENST00000558253 ERVK-24P63145 666 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 ICA1Q05084 483 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 CKAP4Q07065 602 aaKnown RBP9.23□□□□□ -0.93
SPG11-209ENST00000558253 MCM6Q14566 821 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 SPA17Q15506 151 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 CDC37Q16543 378 aaPredicted RBP9.23□□□□□ -0.93
SPG11-209ENST00000558253 QRICH1Q2TAL8 776 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 KIF4BQ2VIQ3 1234 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 EDRF1Q3B7T1 1238 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 IQCEQ6IPM2 695 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 FBXO11Q86XK2 927 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 GPIHBP1Q8IV16 184 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 RTKN2Q8IZC4 609 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 DESI2Q9BSY9 194 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 MXD3Q9BW11 206 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 TTYH3Q9C0H2 523 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 CPVLQ9H3G5 476 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 NDST4Q9H3R1 872 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 SEMA6BQ9H3T3 888 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 SH2D4AQ9H788 454 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 MRPL44Q9H9J2 332 aaKnown RBP9.23□□□□□ -0.93
SPG11-209ENST00000558253 ARHGEF10LQ9HCE6 1279 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 KCNMB3Q9NPA1 279 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 LZTFL1Q9NQ48 299 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 HDAC9Q9UKV0 1011 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 PNMA2Q9UL42 364 aa9.23□□□□□ -0.93
SPG11-209ENST00000558253 FRMD3A2A2Y4 597 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 TRIM49BA6NDI0 452 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 SPDYE3A6NKU9 549 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 F5H6K3 240 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 PES1O00541 588 aaKnown RBP9.22□□□□□ -0.93
SPG11-209ENST00000558253 PPP1R11O60927 126 aaPredicted RBP9.22□□□□□ -0.93
SPG11-209ENST00000558253 LCA5LO95447 670 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 PRLRP16471 622 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 ANXA13P27216 316 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 RPA1P27694 616 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 SREBF1P36956 1147 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 ARHGAP25P42331 645 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 RBM5P52756 815 aaKnown RBP eCLIP9.22□□□□□ -0.93
SPG11-209ENST00000558253 PMS1P54277 932 aaKnown RBP9.22□□□□□ -0.93
SPG11-209ENST00000558253 CHMP4BP1P59074 171 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 ATP2B2Q01814 1243 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 KLRC3Q07444 240 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 GPS2Q13227 327 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 MTF1Q14872 753 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 MIIPQ5JXC2 388 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 SYDE2Q5VT97 1194 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 SAMD3Q8N6K7 520 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 CCDC155Q8N6L0 562 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 KIAA0895Q8NCT3 520 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 CHURC1Q8WUH1 139 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 CRYGNQ8WXF5 182 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 RUBCNQ92622 972 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 HAS1Q92839 578 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 TATDN2Q93075 761 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 CCDC42Q96M95 316 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 PCMTD1Q96MG8 357 aaPredicted RBP9.22□□□□□ -0.93
SPG11-209ENST00000558253 PLIN2Q99541 437 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 ANO3Q9BYT9 981 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 GOPCQ9HD26 462 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 ARFGAP3Q9NP61 516 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 GINM1Q9NU53 330 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 PANK4Q9NVE7 773 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 PLAGL2Q9UPG8 496 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 DNM3Q9UQ16 869 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 DAAM1Q9Y4D1 1078 aa9.22□□□□□ -0.93
SPG11-209ENST00000558253 GREB1LQ9C091 1923 aaPredicted RBP9.22□□□□□ -0.93
SPG11-209ENST00000558253 SSU72P8A0A1W2PR75 194 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 CTAGE15A4D2H0 777 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 C3orf80F5H4A9 247 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 EDIL3O43854 480 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 ZRANB2O95218 330 aaKnown RBP eCLIP9.21□□□□□ -0.94
SPG11-209ENST00000558253 PLA2G4BP0C869 781 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 CTAGE8P0CG41 777 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 BMP3P12645 472 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 ARHGAP4P98171 946 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 KIF5AQ12840 1032 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 NFIAQ12857 509 aa9.21□□□□□ -0.94
SPG11-209ENST00000558253 NAA30Q147X3 362 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms