RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 SCINQ9Y6U3 715 aa8.21□□□□□ -1.1
MARK3-212ENST00000558223 ZNF804BA4D1E1 1349 aa8.21□□□□□ -1.1
MARK3-212ENST00000558223 SALL1Q9NSC2 1324 aa8.21□□□□□ -1.1
MARK3-212ENST00000558223 DNAJC25-GNG10A0A024R161 153 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 KLF18A0A0U1RQI7 1052 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 TCRBV5S4A2TA0A5A2 114 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 MEN1O00255 615 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 SLC3A2P08195 630 aaKnown RBP8.2□□□□□ -1.1
MARK3-212ENST00000558223 VEGFBP49765 207 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 TERF1P54274 439 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 RPS8P62241 208 aaKnown RBP8.2□□□□□ -1.1
MARK3-212ENST00000558223 CLCQ05315 142 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 CHRNDQ07001 517 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 MTMR1Q13613 665 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 SCARF1Q14162 830 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 TMEM95Q3KNT9 176 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 CCDC178Q5BJE1 867 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 AKNAD1Q5T1N1 836 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 ACBD5Q5T8D3 534 aaPredicted RBP8.2□□□□□ -1.1
MARK3-212ENST00000558223 HGSNATQ68CP4 663 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 SASS6Q6UVJ0 657 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 RBM43Q6ZSC3 357 aaKnown RBP8.2□□□□□ -1.1
MARK3-212ENST00000558223 TTC6Q86TZ1 520 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 C19orf47Q8N9M1 422 aaKnown RBP8.2□□□□□ -1.1
MARK3-212ENST00000558223 ZNF280CQ8ND82 737 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 FBXO18Q8NFZ0 1043 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 BICD2Q8TD16 824 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 RHBDD1Q8TEB9 315 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 ACSBG1Q96GR2 724 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 TNMDQ9H2S6 317 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 PIH1D3Q9NQM4 214 aaKnown RBP8.2□□□□□ -1.1
MARK3-212ENST00000558223 LATS2Q9NRM7 1088 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 RTEL1Q9NZ71 1219 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 ORC3Q9UBD5 711 aaPredicted RBP8.2□□□□□ -1.1
MARK3-212ENST00000558223 STK36Q9NRP7 1315 aa8.2□□□□□ -1.1
MARK3-212ENST00000558223 IQCA1LA6NCM1 817 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 CCDC69A6NI79 296 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 GOLGA8BA8MQT2 603 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 SH2B2O14492 632 aaPredicted RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 PLD2O14939 933 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 ZBTB43O43298 467 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 XYLBO75191 536 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 CALM1P0DP23 149 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 CALM2P0DP24 149 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 CALM3P0DP25 149 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 EPB42P16452 691 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 XBP1P17861 261 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 TRAPPC10P48553 1259 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 METAP2P50579 478 aaKnown RBP eCLIP8.19□□□□□ -1.1
MARK3-212ENST00000558223 PURAQ00577 322 aaKnown RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 PICALMQ13492 652 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 SAFBQ15424 915 aaKnown RBP eCLIP8.19□□□□□ -1.1
MARK3-212ENST00000558223 FNDC3BQ53EP0 1204 aaKnown RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 RNF219Q5W0B1 726 aaPredicted RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 ADALQ6DHV7 355 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 MRM1Q6IN84 353 aaKnown RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 MRPL14Q6P1L8 145 aaKnown RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 TRIM22Q8IYM9 498 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 SYNE4Q8N205 404 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 MAGEB6Q8N7X4 407 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 ESR2Q92731 530 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 CCDC34Q96HJ3 373 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 HSH2DQ96JZ2 352 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 TCEANC2Q96MN5 208 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 CEP63Q96MT8 703 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 CAMKK2Q96RR4 588 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 YIPF4Q9BSR8 244 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 FUCA2Q9BTY2 467 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 BRIP1Q9BX63 1249 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 RTFDC1Q9BY42 306 aaPredicted RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 NAT10Q9H0A0 1025 aaKnown RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 CLSTN2Q9H4D0 955 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 ZFAND3Q9H8U3 227 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 NCOA5Q9HCD5 579 aaKnown RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 NXF1Q9UBU9 619 aaKnown RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 USP21Q9UK80 565 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 NAP1L2Q9ULW6 460 aaPredicted RBP8.19□□□□□ -1.1
MARK3-212ENST00000558223 LZTS1Q9Y250 596 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 TAF6LQ9Y6J9 622 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 DOT1LQ8TEK3 1739 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 NUP98P52948 1817 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 NID2Q14112 1375 aa8.19□□□□□ -1.1
MARK3-212ENST00000558223 A0A1W2PQH9 124 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 ZNF500O60304 480 aaPredicted RBP8.18□□□□□ -1.1
MARK3-212ENST00000558223 JAK2O60674 1132 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 KINO60870 393 aaKnown RBP8.18□□□□□ -1.1
MARK3-212ENST00000558223 ZIC2O95409 532 aaPredicted RBP8.18□□□□□ -1.1
MARK3-212ENST00000558223 CTDNEP1O95476 244 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 EYA4O95677 639 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 F2P00734 622 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 PTMAP06454 111 aaKnown RBP8.18□□□□□ -1.1
MARK3-212ENST00000558223 ADH1AP07327 375 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 ARAFP10398 606 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 GMPRP36959 345 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 CCNFP41002 786 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 IARSP41252 1262 aaKnown RBP8.18□□□□□ -1.1
MARK3-212ENST00000558223 PLA2G4AP47712 749 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 TDO2P48775 406 aa8.18□□□□□ -1.1
MARK3-212ENST00000558223 PIP4K2BP78356 416 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms