RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 AGO4Q9HCK5 861 aaKnown RBP15.53■□□□□ 0.08
SHMT2-234ENST00000557703 MMP3P08254 477 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 PURAQ00577 322 aaKnown RBP15.52■□□□□ 0.08
SHMT2-234ENST00000557703 KRT76Q01546 638 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 PTPN11Q06124 597 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-234ENST00000557703 SNX17Q15036 470 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 INF2Q27J81 1249 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 PRR16Q569H4 304 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 CYFIP1Q7L576 1253 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 SLFN12Q8IYM2 578 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 OXER1Q8TDS5 423 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 AFG1LQ8WV93 481 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 SEPT1Q8WYJ6 367 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 ZNF577Q9BSK1 485 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 MTG1Q9BT17 334 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-234ENST00000557703 SENP6Q9GZR1 1112 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-234ENST00000557703 JPH1Q9HDC5 661 aaPredicted RBP15.52■□□□□ 0.08
SHMT2-234ENST00000557703 STARD7Q9NQZ5 370 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 GJB4Q9NTQ9 266 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 SLC9A2Q9UBY0 812 aa15.52■□□□□ 0.08
SHMT2-234ENST00000557703 NOL7Q9UMY1 257 aaKnown RBP15.52■□□□□ 0.08
SHMT2-234ENST00000557703 PDE4DIPQ5VU43 2346 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 A0A0U1RQG5 324 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-234ENST00000557703 A0A1W2PQ45 241 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-234ENST00000557703 A0A1W2PQY0 241 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 SLC26A2P50443 739 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 MLLT1Q03111 559 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-234ENST00000557703 NR5A1Q13285 461 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 LETM2Q2VYF4 491 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 ZNF746Q6NUN9 644 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-234ENST00000557703 SLC39A5Q6ZMH5 540 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 BRAPQ7Z569 592 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 SMAP1Q8IYB5 467 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-234ENST00000557703 RDM1Q8NG50 284 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 CYP2W1Q8TAV3 490 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 COPS5Q92905 334 aa15.51■□□□□ 0.07
SHMT2-234ENST00000557703 LENG1Q96BZ8 264 aaPredicted RBP15.51■□□□□ 0.07
SHMT2-234ENST00000557703 DDX25Q9UHL0 483 aaKnown RBP15.51■□□□□ 0.07
SHMT2-234ENST00000557703 ADAMTS3O15072 1205 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 ATP9AO75110 1047 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 ATG7O95352 703 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 BAG4O95429 457 aaKnown RBP15.5■□□□□ 0.07
SHMT2-234ENST00000557703 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-234ENST00000557703 ARP10275 920 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 HSDL1Q3SXM5 330 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 RILPL1Q5EBL4 403 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 NFRKBQ6P4R8 1299 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 SLC43A3Q8NBI5 491 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 LENG9Q96B70 501 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 GPR20Q99678 358 aa15.5■□□□□ 0.07
SHMT2-234ENST00000557703 ZNF215Q9UL58 517 aaPredicted RBP15.5■□□□□ 0.07
SHMT2-234ENST00000557703 MKI67P46013 3256 aaKnown RBP15.49■□□□□ 0.07
SHMT2-234ENST00000557703 MYADML2A6NDP7 307 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 LAD1O00515 517 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 DHX15O43143 795 aaKnown RBP15.49■□□□□ 0.07
SHMT2-234ENST00000557703 EDIL3O43854 480 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 CCNT1O60563 726 aaKnown RBP15.49■□□□□ 0.07
SHMT2-234ENST00000557703 SFNP31947 248 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 BEX3Q00994 111 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 ANKRD33Q7Z3H0 272 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 SESTD1Q86VW0 696 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 SLC5A5Q92911 643 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 VTI1AQ96AJ9 217 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 KCNMB3Q9NPA1 279 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 NR2E3Q9Y5X4 410 aa15.49■□□□□ 0.07
SHMT2-234ENST00000557703 SCN10AQ9Y5Y9 1956 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 ARVCFO00192 962 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 MSH4O15457 936 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 GAS7O60861 476 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 F2P00734 622 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 SUPT20HL2P0C7V6 817 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 CDK7P50613 346 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 JAK3P52333 1124 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 GUCY1B3Q02153 619 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 TMEM63BQ5T3F8 832 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 CXCL17Q6UXB2 119 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 PLPPR4Q7Z2D5 763 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 ETNPPLQ8TBG4 499 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 DIS3LQ8TF46 1054 aaKnown RBP15.48■□□□□ 0.07
SHMT2-234ENST00000557703 ZFP91Q96JP5 570 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-234ENST00000557703 SMARCAD1Q9H4L7 1026 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 ZSCAN16Q9H4T2 348 aaPredicted RBP15.48■□□□□ 0.07
SHMT2-234ENST00000557703 AZI2Q9H6S1 392 aa15.48■□□□□ 0.07
SHMT2-234ENST00000557703 EMSYQ7Z589 1322 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 DCDC2CA8MYV0 355 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 WDR64B1ANS9 1081 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 H3BRB1 525 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 HAS3O00219 553 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 TLR3O15455 904 aaKnown RBP15.47■□□□□ 0.07
SHMT2-234ENST00000557703 NEMFO60524 1076 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 LGR5O75473 907 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 PSMD10O75832 226 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 BMP15O95972 392 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 MYL3P08590 195 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 SYT1P21579 422 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 ITGB3BPQ13352 177 aaPredicted RBP15.47■□□□□ 0.07
SHMT2-234ENST00000557703 ITGA7Q13683 1181 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 LRCH2Q5VUJ6 765 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 MCTP1Q6DN14 999 aa15.47■□□□□ 0.07
SHMT2-234ENST00000557703 MIS18BP1Q6P0N0 1132 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms