RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 EPS8L3Q8TE67 593 aaKnown RBP6□□□□□ -1.45
ATXN3-247ENST00000557311 TRIB2Q92519 343 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 LPIN2Q92539 896 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 WNT8BQ93098 351 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 BHLHE41Q9C0J9 482 aaPredicted RBP6□□□□□ -1.45
ATXN3-247ENST00000557311 SENP6Q9GZR1 1112 aaPredicted RBP6□□□□□ -1.45
ATXN3-247ENST00000557311 ASCC2Q9H1I8 757 aaPredicted RBP6□□□□□ -1.45
ATXN3-247ENST00000557311 OSGEPQ9NPF4 335 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 MORF4L1Q9UBU8 362 aa6□□□□□ -1.45
ATXN3-247ENST00000557311 ATRNL1Q5VV63 1379 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 DDTLA6NHG4 134 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 HYAL3O43820 417 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 NBPF7P0C2Y1 421 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 SLC5A1P13866 664 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 ZKSCAN1P17029 563 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 PRDX5P30044 214 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 MAPK4P31152 587 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 HOXA7P31268 230 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 RGS2P41220 211 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 GRIA4P48058 902 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 IRX6P78412 446 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 SMAD3P84022 425 aaKnown RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 DDX10Q13206 875 aaKnown RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 PDE3AQ14432 1141 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 SHHQ15465 462 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 HGSNATQ68CP4 663 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 FDX2Q6P4F2 183 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 SLC4A10Q6U841 1118 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 DTHD1Q6ZMT9 781 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 VN1R5Q7Z5H4 357 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 TICAM2Q86XR7 235 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 CCNJLQ8IV13 435 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 CCAR1Q8IX12 1150 aaKnown RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 ZGPATQ8N5A5 531 aaKnown RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 SOCS4Q8WXH5 440 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 MYLIPQ8WY64 445 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 USP6NLQ92738 828 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 P2RX7Q99572 595 aaKnown RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 RUSC1Q9BVN2 902 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 CEP41Q9BYV8 373 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 OSBPL5Q9H0X9 879 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 DENND2AQ9ULE3 1009 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 SUPT16HQ9Y5B9 1047 aaKnown RBP5.99□□□□□ -1.45
ATXN3-247ENST00000557311 UTYO14607 1347 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 SALL1Q9NSC2 1324 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 FANCIQ9NVI1 1328 aa5.99□□□□□ -1.45
ATXN3-247ENST00000557311 TMEM265A0A087WTH1 108 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 EYA2O00167 538 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 GAS2O43903 313 aaKnown RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 MSCO60682 206 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 CLSTN1O94985 981 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 ESRRAP11474 423 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 FOSL2P15408 326 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 CCND3P30281 292 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 HMGCS2P54868 508 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 IRX3P78415 501 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 EXOSC9Q06265 439 aaKnown RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 KIAA0319Q5VV43 1072 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 MFSD14CQ5VZR4 134 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 CCDC84Q86UT8 332 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 ANKRD44Q8N8A2 993 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 FOXD4L4Q8WXT5 416 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 ALKBH8Q96BT7 664 aaKnown RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 FAM122AQ96E09 287 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 EDC3Q96F86 508 aaKnown RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 MEGF10Q96KG7 1140 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 CLEC4MQ9H2X3 399 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 TTYH1Q9H313 450 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 BICC1Q9H694 974 aaKnown RBP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.98□□□□□ -1.45
ATXN3-247ENST00000557311 AS3MTQ9HBK9 375 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 GAKO14976 1311 aa5.98□□□□□ -1.45
ATXN3-247ENST00000557311 ZSWIM8A7E2V4 1837 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 C19orf81C9J6K1 198 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 DNM1LO00429 736 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 ADAM11O75078 769 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 GLRX3O76003 335 aaKnown RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 MAP4K4O95819 1239 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 PLA2G5P39877 138 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 CAP2P40123 477 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 BACE1P56817 501 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 RTP1P59025 263 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 HERVK_113P62684 666 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 PICALMQ13492 652 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 LRP8Q14114 963 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 C9orf50Q5SZB4 431 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 SPTY2D1Q68D10 685 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 PI16Q6UXB8 463 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 GPR142Q7Z601 462 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 PLEKHH3Q7Z736 793 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 WDR63Q8IWG1 891 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 FTSJ3Q8IY81 847 aaKnown RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 TMEM130Q8N3G9 435 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 C12orf50Q8NA57 414 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-247ENST00000557311 ARRDC4Q8NCT1 418 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 KLHDC4Q8TBB5 520 aa5.97□□□□□ -1.45
ATXN3-247ENST00000557311 LPAR1Q92633 364 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms