RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PANK4Q9NVE7 773 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 ATP6V0A2Q9Y487 856 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 CAPN7Q9Y6W3 813 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 ROBO3Q96MS0 1386 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 ABCB11O95342 1321 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 NR1D1P20393 614 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 GUCY2CP25092 1073 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 HPDP32754 393 aaPredicted RBP12.54□□□□□ -0.4
SRP54-213ENST00000556994 CLEC10AQ8IUN9 316 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 OR2W6PQ8NHA6 318 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 DNAJC19Q96DA6 116 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 SETDB2Q96T68 719 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 TSKSQ9UJT2 592 aa12.54□□□□□ -0.4
SRP54-213ENST00000556994 E9PMD0 336 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 MYO1FO00160 1098 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 KCNK3O14649 394 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 ACTN1P12814 892 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 BTDP43251 543 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 KLHL30Q0D2K2 578 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.4
SRP54-213ENST00000556994 CDC37Q16543 378 aaPredicted RBP12.53□□□□□ -0.4
SRP54-213ENST00000556994 SLC18A3Q16572 532 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 ZCWPW2Q504Y3 356 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 CEP85LQ5SZL2 805 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 KCNV1Q6PIU1 500 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 KDM7AQ6ZMT4 941 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 DDX42Q86XP3 938 aaKnown RBP eCLIP12.53□□□□□ -0.4
SRP54-213ENST00000556994 LRRC47Q8N1G4 583 aaKnown RBP12.53□□□□□ -0.4
SRP54-213ENST00000556994 WDR66Q8TBY9 1149 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 GPCPD1Q9NPB8 672 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 PLAAQ9Y263 795 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.53□□□□□ -0.4
SRP54-213ENST00000556994 SNED1Q8TER0 1413 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 GRID2IPA4D2P6 1211 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 MARCH6O60337 910 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 TM4SF1P30408 202 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 ADCY7P51828 1080 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 NFIXQ14938 502 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 FAM26FQ5R3K3 315 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 OTUD6BQ8N6M0 293 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 NEDD1Q8NHV4 660 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
SRP54-213ENST00000556994 EDEM3Q9BZQ6 932 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 RNF14Q9UBS8 474 aa12.53□□□□□ -0.4
SRP54-213ENST00000556994 IRS2Q9Y4H2 1338 aa12.52□□□□□ -0.4
SRP54-213ENST00000556994 FAM170AA1A519 330 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 MNAT1P51948 309 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 PDE4CQ08493 712 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 PSMD2Q13200 908 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 PDIA5Q14554 519 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 TMEM119Q4V9L6 283 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 C16orf86Q6ZW13 317 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 TEX11Q8IYF3 940 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 USP38Q8NB14 1042 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 ZNF473Q8WTR7 871 aaKnown RBP12.52□□□□□ -0.41
SRP54-213ENST00000556994 HAS1Q92839 578 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 ATP6V1G3Q96LB4 118 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 AP1M1Q9BXS5 423 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 RTFDC1Q9BY42 306 aaPredicted RBP12.52□□□□□ -0.41
SRP54-213ENST00000556994 RAB34Q9BZG1 259 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 EPN3Q9H201 632 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 PCDHGC5Q9Y5F6 944 aa12.52□□□□□ -0.41
SRP54-213ENST00000556994 H0YHG0 523 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 KIAA0754O94854 1291 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 PDHBP11177 359 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 PPP4CP60510 307 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 ERVK-9P63128 1117 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 HDLBPQ00341 1268 aaKnown RBP12.51□□□□□ -0.41
SRP54-213ENST00000556994 SUGP1Q8IWZ8 645 aaKnown RBP12.51□□□□□ -0.41
SRP54-213ENST00000556994 PROM2Q8N271 834 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 RIOX1Q9H6W3 641 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 LUC7LQ9NQ29 371 aaKnown RBP12.51□□□□□ -0.41
SRP54-213ENST00000556994 PPANQ9NQ55 473 aaKnown RBP12.51□□□□□ -0.41
SRP54-213ENST00000556994 MEFVO15553 781 aaPredicted RBP12.51□□□□□ -0.41
SRP54-213ENST00000556994 CEP104O60308 925 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 PPP1R37O75864 691 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 EPS15P42566 896 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 GSTO1P78417 241 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 PTK2Q05397 1052 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 ADAM9Q13443 819 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 ASIC2Q16515 512 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 PTGISQ16647 500 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
SRP54-213ENST00000556994 RNF187Q5TA31 235 aaPredicted RBP12.51□□□□□ -0.41
SRP54-213ENST00000556994 TRIM59Q8IWR1 403 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 TAF4BQ92750 862 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 CCT8L2Q96SF2 557 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 ZNF287Q9HBT7 754 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 BCCIPQ9P287 314 aaKnown RBP eCLIP12.51□□□□□ -0.41
SRP54-213ENST00000556994 DDX25Q9UHL0 483 aaKnown RBP12.51□□□□□ -0.41
SRP54-213ENST00000556994 KIAA1024Q9UPX6 916 aa12.51□□□□□ -0.41
SRP54-213ENST00000556994 E7EVH7 732 aa12.5□□□□□ -0.41
SRP54-213ENST00000556994 SLC9A1P19634 815 aa12.5□□□□□ -0.41
SRP54-213ENST00000556994 MDH1P40925 334 aaKnown RBP12.5□□□□□ -0.41
SRP54-213ENST00000556994 KCNH2Q12809 1159 aa12.5□□□□□ -0.41
SRP54-213ENST00000556994 ITGB3BPQ13352 177 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms