RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 BTAF1O14981 1849 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 EDC4Q6P2E9 1401 aaKnown RBP6.78□□□□□ -1.32
ATXN3-233ENST00000555816 NSD3Q9BZ95 1437 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 FOXD2O60548 495 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-233ENST00000555816 FKTNO75072 461 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 EFEMP2O95967 443 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 GSNP06396 782 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 MMP10P09238 476 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 FBLN1P23142 703 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 CRKP46108 304 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 GALK1P51570 392 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 AFF3P51826 1226 aaKnown RBP6.78□□□□□ -1.32
ATXN3-233ENST00000555816 AUHQ13825 339 aaKnown RBP6.78□□□□□ -1.32
ATXN3-233ENST00000555816 NFIXQ14938 502 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 HSF5Q4G112 596 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-233ENST00000555816 C9orf131Q5VYM1 1079 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 SMIM5Q71RC9 77 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 SLCO6A1Q86UG4 719 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 GIPC2Q8TF65 315 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 PIGBQ92521 554 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 RTEL1Q9NZ71 1219 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 ADAMTS20P59510 1910 aa6.78□□□□□ -1.32
ATXN3-233ENST00000555816 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
ATXN3-233ENST00000555816 PCDH11XQ9BZA7 1347 aa6.77□□□□□ -1.32
ATXN3-233ENST00000555816 PCDH11YQ9BZA8 1340 aa6.77□□□□□ -1.32
ATXN3-233ENST00000555816 CYP27B1O15528 508 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 IMPDH2P12268 514 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 VAV1P15498 845 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 DPEP1P16444 411 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 PI3P19957 117 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 POLR2BP30876 1174 aaKnown RBP6.77□□□□□ -1.33
ATXN3-233ENST00000555816 TMF1P82094 1093 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 CYP4F8P98187 520 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 CLCQ05315 142 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 NR1I3Q14994 352 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 SEZ6Q53EL9 994 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 GK5Q6ZS86 529 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 TMEM192Q8IY95 271 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 SMC1BQ8NDV3 1235 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 CXorf38Q8TB03 319 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 NKD1Q969G9 470 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 EAF1Q96JC9 268 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-233ENST00000555816 MKRN2Q9H000 416 aaKnown RBP6.77□□□□□ -1.33
ATXN3-233ENST00000555816 KLHL14Q9P2G3 628 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 ADAMTS1Q9UHI8 967 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 FBXL21Q9UKT6 434 aa6.77□□□□□ -1.33
ATXN3-233ENST00000555816 QSER1Q2KHR3 1735 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 WNK3Q9BYP7 1800 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 TRIM13O60858 407 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 SYN1P17600 705 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 MCM4P33991 863 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 CNKSR3Q6P9H4 555 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 LDHDQ86WU2 507 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 SP8Q8IXZ3 490 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 TAB3Q8N5C8 712 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-233ENST00000555816 PLCD4Q9BRC7 762 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 CDADC1Q9BWV3 514 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 CARD11Q9BXL7 1154 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 ERVK13-1Q9NX77 482 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 UBP1Q9NZI7 540 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 CD163L1Q9NR16 1453 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 QRICH2Q9H0J4 1663 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 MEGF6O75095 1541 aa6.76□□□□□ -1.33
ATXN3-233ENST00000555816 A0A1W2PP64 1363 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 A0A0G2JLL6 359 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-233ENST00000555816 PRKCAP17252 672 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 KCNA3P22001 575 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 CDR1P51861 262 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 EPHB3P54753 998 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 RBM10P98175 930 aaKnown RBP6.75□□□□□ -1.33
ATXN3-233ENST00000555816 ITPK1Q13572 414 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 MRPL58Q14197 206 aaKnown RBP6.75□□□□□ -1.33
ATXN3-233ENST00000555816 RRS1Q15050 365 aaKnown RBP6.75□□□□□ -1.33
ATXN3-233ENST00000555816 HSP90AB2PQ58FF8 381 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
ATXN3-233ENST00000555816 HLA-DQA1Q5Y7H0 255 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 ZPBP2Q6X784 338 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 FAM129CQ86XR2 697 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 C7orf61Q8IZ16 206 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 SLC6A18Q96N87 628 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 SIN3AQ96ST3 1273 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 XYLT2Q9H1B5 865 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 TMOD3Q9NYL9 352 aa6.75□□□□□ -1.33
ATXN3-233ENST00000555816 SUCOQ9UBS9 1254 aaKnown RBP6.75□□□□□ -1.33
ATXN3-233ENST00000555816 GPR55Q9Y2T6 319 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-233ENST00000555816 RGPD5Q99666 1765 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 PLEKHG2Q9H7P9 1386 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 E9PSI1 815 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 FYB1O15117 783 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 HSPA1AP0DMV8 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-233ENST00000555816 HSPA1BP0DMV9 641 aaKnown RBP6.74□□□□□ -1.33
ATXN3-233ENST00000555816 RFC4P35249 363 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 NOP2P46087 812 aaKnown RBP6.74□□□□□ -1.33
ATXN3-233ENST00000555816 PANK1Q8TE04 598 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 EPB41L4AQ9HCS5 686 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-233ENST00000555816 TNFRSF12AQ9NP84 129 aa6.74□□□□□ -1.33
ATXN3-233ENST00000555816 LUC7LQ9NQ29 371 aaKnown RBP6.74□□□□□ -1.33
ATXN3-233ENST00000555816 RNF181Q9P0P0 153 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms