RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 ZMYND12Q9H0C1 365 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 PALMO75781 387 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 CUL1Q13616 776 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 SPTY2D1Q68D10 685 aaPredicted RBP17.6■□□□□ 0.41
MARK3-209ENST00000555235 KRT25Q7Z3Z0 450 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 DZIP1Q86YF9 867 aaKnown RBP17.6■□□□□ 0.41
MARK3-209ENST00000555235 SYN2Q92777 582 aaPredicted RBP17.6■□□□□ 0.41
MARK3-209ENST00000555235 P3H4Q92791 437 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 LZTS2Q9BRK4 669 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 ISCUQ9H1K1 167 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 CENPHQ9H3R5 247 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 MKNK2Q9HBH9 465 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 PCDHGC5Q9Y5F6 944 aa17.6■□□□□ 0.41
MARK3-209ENST00000555235 CES2O00748 559 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 CLGNO14967 610 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 TRAPPC3O43617 180 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 MYBP10242 640 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 HOXA7P31268 230 aaPredicted RBP17.59■□□□□ 0.41
MARK3-209ENST00000555235 LRRC63Q05C16 580 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 NAB2Q15742 525 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 MEI1Q5TIA1 1274 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 HGSNATQ68CP4 663 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 PARP9Q8IXQ6 854 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 TMEM47Q9BQJ4 181 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 MMTAG2Q9BU76 263 aaKnown RBP17.59■□□□□ 0.41
MARK3-209ENST00000555235 ODF2LQ9ULJ1 636 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 JAG2Q9Y219 1238 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 TSPY3P0CV98 308 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 TSPY8P0CW00 308 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 NONOQ15233 471 aaKnown RBP eCLIP17.59■□□□□ 0.41
MARK3-209ENST00000555235 CYB5D1Q6P9G0 228 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 TXNRD3Q86VQ6 643 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 SGSM3Q96HU1 749 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 NGLY1Q96IV0 654 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 VEZTQ9HBM0 779 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 DDX20Q9UHI6 824 aaKnown RBP17.59■□□□□ 0.41
MARK3-209ENST00000555235 SLC12A6Q9UHW9 1150 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 IRS2Q9Y4H2 1338 aa17.59■□□□□ 0.41
MARK3-209ENST00000555235 CCDC88AQ3V6T2 1871 aa17.58■□□□□ 0.41
MARK3-209ENST00000555235 RAD51CO43502 376 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 CCNT1O60563 726 aaKnown RBP17.58■□□□□ 0.4
MARK3-209ENST00000555235 SERPING1P05155 500 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 IFFO1Q0D2I5 559 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 LETM2Q2VYF4 491 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 FUKQ8N0W3 1084 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 USP38Q8NB14 1042 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 SH3RF3Q8TEJ3 882 aaPredicted RBP17.58■□□□□ 0.4
MARK3-209ENST00000555235 SPZ1Q9BXG8 430 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 SPATA31A1Q5TZJ5 1347 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 HLTFQ14527 1009 aaKnown RBP eCLIP17.58■□□□□ 0.4
MARK3-209ENST00000555235 TBC1D9BQ66K14 1250 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 GUF1Q8N442 669 aaKnown RBP17.58■□□□□ 0.4
MARK3-209ENST00000555235 HPS3Q969F9 1004 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 SLC39A2Q9NP94 309 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 CEP72Q9P209 647 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 TMEM59LQ9UK28 342 aa17.58■□□□□ 0.4
MARK3-209ENST00000555235 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
MARK3-209ENST00000555235 C5orf60A6NFR6 353 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 KLRF2D3W0D1 207 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 FTCDO95954 541 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 PAEPP09466 180 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 GOLGA8HP0CJ92 632 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 HSD17B3P37058 310 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 TECP42680 631 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 NAPAP54920 295 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 ANKRD20A8PQ5CZ79 823 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 SFMBT2Q5VUG0 894 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 ZNF444Q8N0Y2 327 aaPredicted RBP17.57■□□□□ 0.4
MARK3-209ENST00000555235 N4BP2L2Q92802 583 aaPredicted RBP17.57■□□□□ 0.4
MARK3-209ENST00000555235 MTMR7Q9Y216 660 aa17.57■□□□□ 0.4
MARK3-209ENST00000555235 PVALEFA0A1B0GWK0 134 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 EZRP15311 586 aaKnown RBP17.56■□□□□ 0.4
MARK3-209ENST00000555235 SLC8A1P32418 973 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 CTNNA1P35221 906 aaKnown RBP17.56■□□□□ 0.4
MARK3-209ENST00000555235 MRPL12P52815 198 aaKnown RBP17.56■□□□□ 0.4
MARK3-209ENST00000555235 MTMR3Q13615 1198 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 AGBL2Q5U5Z8 902 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 FOXR2Q6PJQ5 311 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 NEK8Q86SG6 692 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 CACNA2D3Q8IZS8 1091 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 SLC44A5Q8NCS7 719 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 LINC00116Q8NCU8 138 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 BANK1Q8NDB2 785 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 TAF4BQ92750 862 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 CALML4Q96GE6 196 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 OSBPL7Q9BZF2 842 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 THRAP3Q9Y2W1 955 aaKnown RBP17.56■□□□□ 0.4
MARK3-209ENST00000555235 SMCO2A6NFE2 343 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 H0YGN5 161 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 RGL2O15211 777 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 RASA1P20936 1047 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 LACTB2Q53H82 288 aaPredicted RBP17.56■□□□□ 0.4
MARK3-209ENST00000555235 UNC13DQ70J99 1090 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 SV2BQ7L1I2 683 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 C6orf50Q9HD87 102 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 STX8Q9UNK0 236 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 NFS1Q9Y697 457 aa17.56■□□□□ 0.4
MARK3-209ENST00000555235 KLRC1P26715 233 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms