RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 COL6A1P12109 1028 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 KCNA4P22459 653 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 CIITAP33076 1130 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 KRT2P35908 639 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 SETQ01105 290 aaPredicted RBP12.05□□□□□ -0.48
TMEM260-206ENST00000555046 METTL7BQ6UX53 244 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 USP38Q8NB14 1042 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 PPTC7Q8NI37 304 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 DIS3LQ8TF46 1054 aaKnown RBP12.05□□□□□ -0.48
TMEM260-206ENST00000555046 SNX21Q969T3 373 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 SPATA33Q96N06 139 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 SDF4Q9BRK5 362 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 STARD7Q9NQZ5 370 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 TMEM260Q9NX78 707 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 TCEAL9Q9UHQ7 104 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 KCNJ14Q9UNX9 436 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 SMC3Q9UQE7 1217 aa12.05□□□□□ -0.48
TMEM260-206ENST00000555046 DDX49Q9Y6V7 483 aaKnown RBP12.05□□□□□ -0.48
TMEM260-206ENST00000555046 ASGR1P07306 291 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 PDIA4P13667 645 aaKnown RBP12.04□□□□□ -0.48
TMEM260-206ENST00000555046 ITGB5P18084 799 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 PDCP20941 246 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 GNL2Q13823 731 aaKnown RBP12.04□□□□□ -0.48
TMEM260-206ENST00000555046 C1orf53Q5VUE5 145 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 MYSM1Q5VVJ2 828 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 CCSAPQ6IQ19 270 aaPredicted RBP12.04□□□□□ -0.48
TMEM260-206ENST00000555046 MOXD1Q6UVY6 613 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 FBXO18Q8NFZ0 1043 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 IL31RAQ8NI17 732 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 TNPO1Q92973 898 aaKnown RBP12.04□□□□□ -0.48
TMEM260-206ENST00000555046 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
TMEM260-206ENST00000555046 AIFM3Q96NN9 605 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 KCNH7Q9NS40 1196 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 CACNA1GO43497 2377 aa12.04□□□□□ -0.48
TMEM260-206ENST00000555046 A0A0U1RQG5 324 aaPredicted RBP12.03□□□□□ -0.48
TMEM260-206ENST00000555046 M0R2N6 131 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 HAX1O00165 279 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 ARIH2O95376 493 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 GGPS1O95749 300 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 MMP1P03956 469 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 GCFC2P16383 781 aaKnown RBP12.03□□□□□ -0.48
TMEM260-206ENST00000555046 KRT40Q6A162 431 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 SLC39A5Q6ZMH5 540 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 PLA2G4DQ86XP0 818 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 HSCBQ8IWL3 235 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 TBCKQ8TEA7 893 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 AFG1LQ8WV93 481 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 SEPT1Q8WYJ6 367 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 MTG1Q9BT17 334 aaPredicted RBP12.03□□□□□ -0.48
TMEM260-206ENST00000555046 KATNAL1Q9BW62 490 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 FOXP1Q9H334 677 aaPredicted RBP12.03□□□□□ -0.48
TMEM260-206ENST00000555046 TBC1D22BQ9NU19 505 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 MROH7Q68CQ1 1323 aa12.03□□□□□ -0.48
TMEM260-206ENST00000555046 ZNFX1Q9P2E3 1918 aaKnown RBP12.02□□□□□ -0.49
TMEM260-206ENST00000555046 CYP3A7-CYP3A51PA0A087WV96 503 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 A0A1W2PQ45 241 aaPredicted RBP12.02□□□□□ -0.49
TMEM260-206ENST00000555046 A0A1W2PQY0 241 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 H3BQV1 296 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 K7ELQ4 463 aaPredicted RBP12.02□□□□□ -0.49
TMEM260-206ENST00000555046 ADCY6O43306 1168 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 HSP90AA1P07900 732 aaKnown RBP12.02□□□□□ -0.49
TMEM260-206ENST00000555046 MYL3P08590 195 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 FOSL2P15408 326 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 UBA1P22314 1058 aaKnown RBP12.02□□□□□ -0.49
TMEM260-206ENST00000555046 CYP3A7P24462 503 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 BEX3Q00994 111 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 ARHGAP1Q07960 439 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 CUL4AQ13619 759 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 PRR16Q569H4 304 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 PPP4R3AQ6IN85 833 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 CYFIP1Q7L576 1253 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 NEK8Q86SG6 692 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 DIS3L2Q8IYB7 885 aaKnown RBP12.02□□□□□ -0.49
TMEM260-206ENST00000555046 ADAMTS19Q8TE59 1207 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 CRYGNQ8WXF5 182 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 COPS5Q92905 334 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 FERMT2Q96AC1 680 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 LENG1Q96BZ8 264 aaPredicted RBP12.02□□□□□ -0.49
TMEM260-206ENST00000555046 PGBD1Q96JS3 809 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 TOX2Q96NM4 488 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 ZNF577Q9BSK1 485 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 PRKAG2Q9UGJ0 569 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 CFAP54Q96N23 3096 aa12.02□□□□□ -0.49
TMEM260-206ENST00000555046 DCDC2CA8MYV0 355 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 BTBD18B2RXH4 712 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 ARVCFO00192 962 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 IPO5O00410 1097 aaKnown RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 CTAGE5O15320 804 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 TLR3O15455 904 aaKnown RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 MARCH6O60337 910 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 BAG4O95429 457 aaKnown RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 MMP3P08254 477 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 SUPT20HL2P0C7V6 817 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 PURAQ00577 322 aaKnown RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 SP2Q02086 613 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 PTPN11Q06124 597 aaPredicted RBP12.01□□□□□ -0.49
TMEM260-206ENST00000555046 ST3GAL1Q11201 340 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 ITGA7Q13683 1181 aa12.01□□□□□ -0.49
TMEM260-206ENST00000555046 NPY5RQ15761 445 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms