RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 MYOCDQ8IZQ8 938 aa18.3■□□□□ 0.52
PCNX1-209ENST00000554879 TEKT3Q9BXF9 490 aa18.3■□□□□ 0.52
PCNX1-209ENST00000554879 LUC7L2Q9Y383 392 aaKnown RBP18.3■□□□□ 0.52
PCNX1-209ENST00000554879 SFI1A8K8P3 1242 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 ERLIN2O94905 339 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 DGKZQ13574 1117 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 OTUD5Q96G74 571 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 EPC1Q9H2F5 836 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 RABGAP1Q9Y3P9 1069 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 WNK3Q9BYP7 1800 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 EGFRP00533 1210 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 FCER1AP12319 257 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 STXBP4Q6ZWJ1 553 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 FAM83AQ86UY5 434 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 STK17AQ9UEE5 414 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 KRT9P35527 623 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 SLC35G1Q2M3R5 365 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 EEPD1Q7L9B9 569 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 SMCR8Q8TEV9 937 aaPredicted RBP18.29■□□□□ 0.52
PCNX1-209ENST00000554879 SHISA4Q96DD7 197 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 IMPACTQ9P2X3 320 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 EIF3CLB5ME19 914 aaKnown RBP18.29■□□□□ 0.52
PCNX1-209ENST00000554879 PRPHP41219 470 aa18.29■□□□□ 0.52
PCNX1-209ENST00000554879 EIF3CQ99613 913 aaKnown RBP18.29■□□□□ 0.52
PCNX1-209ENST00000554879 NFKBIEO00221 500 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 DPYDQ12882 1025 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 RNF207Q6ZRF8 634 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 HS2ST1Q7LGA3 356 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 SRLQ86TD4 932 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 RMDN3Q96TC7 470 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 CCSER1Q9C0I3 900 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 TNRC6CQ9HCJ0 1690 aaKnown RBP18.28■□□□□ 0.52
PCNX1-209ENST00000554879 ACTN2P35609 894 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 BICD1Q96G01 975 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.28■□□□□ 0.52
PCNX1-209ENST00000554879 RNF146Q9NTX7 359 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 RGL1Q9NZL6 768 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 SCN7AQ01118 1682 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 CCDC169A6NNP5 214 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 RDH13Q8NBN7 331 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 GMCL1Q96IK5 515 aa18.28■□□□□ 0.52
PCNX1-209ENST00000554879 GBP2P32456 591 aaPredicted RBP18.27■□□□□ 0.52
PCNX1-209ENST00000554879 FAM107BQ9H098 131 aa18.27■□□□□ 0.52
PCNX1-209ENST00000554879 FAM207AQ9NSI2 230 aaPredicted RBP18.27■□□□□ 0.52
PCNX1-209ENST00000554879 USP11P51784 963 aa18.27■□□□□ 0.52
PCNX1-209ENST00000554879 SPA17Q15506 151 aa18.27■□□□□ 0.52
PCNX1-209ENST00000554879 CALR3Q96L12 384 aaKnown RBP18.27■□□□□ 0.52
PCNX1-209ENST00000554879 NPY5RQ15761 445 aa18.27■□□□□ 0.51
PCNX1-209ENST00000554879 TATDN1Q6P1N9 297 aa18.27■□□□□ 0.51
PCNX1-209ENST00000554879 DESI2Q9BSY9 194 aa18.27■□□□□ 0.51
PCNX1-209ENST00000554879 MAGEF1Q9HAY2 307 aa18.27■□□□□ 0.51
PCNX1-209ENST00000554879 DUOX1Q9NRD9 1551 aa18.27■□□□□ 0.51
PCNX1-209ENST00000554879 USP27XA6NNY8 438 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 DNA2P51530 1060 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 SARM1Q6SZW1 724 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 ZNF280CQ8ND82 737 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 P2RX5Q93086 422 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 RUFY1Q96T51 708 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 SH2D3AQ9BRG2 576 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 AKR1B10O60218 316 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 COPB1P53618 953 aaKnown RBP18.26■□□□□ 0.51
PCNX1-209ENST00000554879 ATG4CQ96DT6 458 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 CRACR2AQ9BSW2 395 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 LRP5O75197 1615 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 CETN3O15182 167 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 CTNND1O60716 968 aaKnown RBP18.26■□□□□ 0.51
PCNX1-209ENST00000554879 MAGEA9P43362 315 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 GMCL1P1Q8NEA9 526 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 CYP2W1Q8TAV3 490 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 TNFRSF25Q93038 417 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 TRIM9Q9C026 710 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 PUF60Q9UHX1 559 aaKnown RBP18.26■□□□□ 0.51
PCNX1-209ENST00000554879 PCDHB13Q9Y5F0 798 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 ATP2C2O75185 946 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 SATB1Q01826 763 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 C9orf131Q5VYM1 1079 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 PIK3R5Q8WYR1 880 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 SPAG5Q96R06 1193 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 ELP3Q9H9T3 547 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 SNED1Q8TER0 1413 aa18.26■□□□□ 0.51
PCNX1-209ENST00000554879 B4DLN1 442 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 KIF5CO60282 957 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 PPP1R11O60927 126 aaPredicted RBP18.25■□□□□ 0.51
PCNX1-209ENST00000554879 PPP1R2P41236 205 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 IREB2P48200 963 aaKnown RBP18.25■□□□□ 0.51
PCNX1-209ENST00000554879 CNGA4Q8IV77 575 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 ADAM21Q9UKJ8 722 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 EBAG9O00559 213 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 WDR46O15213 610 aaKnown RBP18.25■□□□□ 0.51
PCNX1-209ENST00000554879 CAGE1Q8TC20 777 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 RAD54LQ92698 747 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 CNOT6LQ96LI5 555 aaKnown RBP18.25■□□□□ 0.51
PCNX1-209ENST00000554879 RWDD2AQ9UIY3 292 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 NPHP3-ACAD11A0A0J9YXS1 232 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 FAM170AA1A519 330 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 PPARDQ03181 441 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 SYCP1Q15431 976 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 IL17AQ16552 155 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 MKL1Q969V6 931 aa18.25■□□□□ 0.51
PCNX1-209ENST00000554879 COL5A3P25940 1745 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms