RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 RFPL3O75679 317 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 NPTXRO95502 500 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 PYGMP11217 842 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 MC3RP41968 323 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 CAP1Q01518 475 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 GPR19Q15760 415 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 TCERG1LQ5VWI1 586 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 C16orf86Q6ZW13 317 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 BRAPQ7Z569 592 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 CILP2Q8IUL8 1156 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 PWWP2AQ96N64 755 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 IRF2BPLQ9H1B7 796 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 FANCLQ9NW38 375 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 MRPL42Q9Y6G3 142 aaKnown RBP5.91□□□□□ -1.46
SCFD1-214ENST00000554819 TCRBV16S1A1N1A0A5B0 115 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 CCDC66A2RUB6 948 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 PPP1R12AO14974 1030 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-214ENST00000554819 RASGRP1O95267 797 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 LIMS1P48059 325 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 DNM2P50570 870 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 ARHGAP36Q6ZRI8 547 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 TTLL11Q8NHH1 800 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 DACT3Q96B18 629 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-214ENST00000554819 SCLYQ96I15 445 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 CLUHP3Q96NS8 147 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 PDGFDQ9GZP0 370 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-214ENST00000554819 TRIM39Q9HCM9 518 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 EPB41L4AQ9HCS5 686 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-214ENST00000554819 PMF1-BGLAPU3KQ54 211 aa5.9□□□□□ -1.46
SCFD1-214ENST00000554819 TLDC2A0PJX2 215 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 CDC45O75419 566 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 C8BP07358 591 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 PDE6AP16499 860 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 IGFALSP35858 605 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 AFF3P51826 1226 aaKnown RBP5.89□□□□□ -1.47
SCFD1-214ENST00000554819 EPHA5P54756 1037 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 LACTBP83111 547 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-214ENST00000554819 TUSC3Q13454 348 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 KCTD1Q719H9 257 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 FGD2Q7Z6J4 655 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.89□□□□□ -1.47
SCFD1-214ENST00000554819 JAZF1Q86VZ6 243 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 SIAH1Q8IUQ4 282 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 CLEC4DQ8WXI8 215 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 CELF4Q9BZC1 486 aaKnown RBP5.89□□□□□ -1.47
SCFD1-214ENST00000554819 HSPBP1Q9NZL4 362 aa5.89□□□□□ -1.47
SCFD1-214ENST00000554819 ASLP04424 464 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 CKMP06732 381 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 FLT3P36888 993 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 STAT5AP42229 794 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 PABPC4Q13310 644 aaKnown RBP eCLIP5.88□□□□□ -1.47
SCFD1-214ENST00000554819 CR1LQ2VPA4 569 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 TEPPQ6URK8 271 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 DDX53Q86TM3 631 aaKnown RBP5.88□□□□□ -1.47
SCFD1-214ENST00000554819 OSTM1Q86WC4 334 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 FAM26EQ8N5C1 309 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 LINC00482Q8N8I6 264 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 FNIP1Q8TF40 1166 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 CBLCQ9ULV8 474 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 SRPK3Q9UPE1 567 aa5.88□□□□□ -1.47
SCFD1-214ENST00000554819 TMA7Q9Y2S6 64 aaKnown RBP5.88□□□□□ -1.47
SCFD1-214ENST00000554819 TCRBV5S4A2TA0A5A2 114 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 ENPP3O14638 875 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 SMARCA5O60264 1052 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-214ENST00000554819 OPA1O60313 960 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 LRG1P02750 347 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 KRT15P19012 456 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 HTRA3P83110 453 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 GRIN1Q05586 938 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 PAN2Q504Q3 1202 aaKnown RBP5.87□□□□□ -1.47
SCFD1-214ENST00000554819 UBE2R2Q712K3 238 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-214ENST00000554819 C1QL4Q86Z23 238 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 RBM12BQ8IXT5 1001 aaKnown RBP5.87□□□□□ -1.47
SCFD1-214ENST00000554819 TTLL6Q8N841 843 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 KYQ8NBH2 561 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 ZBTB8AQ96BR9 441 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 FEZ1Q99689 392 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 C11orf84Q9BUA3 381 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-214ENST00000554819 INTS7Q9NVH2 962 aaKnown RBP5.87□□□□□ -1.47
SCFD1-214ENST00000554819 MAGEC2Q9UBF1 373 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-214ENST00000554819 COQ6Q9Y2Z9 468 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 TBX22Q9Y458 520 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 ATP23Q9Y6H3 246 aa5.87□□□□□ -1.47
SCFD1-214ENST00000554819 ZNF561-AS1K7EIQ3 104 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 LTFP02788 710 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
SCFD1-214ENST00000554819 AMY2AP04746 511 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 ZSCAN22P10073 491 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-214ENST00000554819 FAHP16930 419 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 KCNA6P17658 529 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 AMY2BP19961 511 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 GJA4P35212 333 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 JAM2P57087 298 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 JAG1P78504 1218 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 TAF7LQ5H9L4 462 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 FIGNQ5HY92 759 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 BTBD8Q5XKL5 378 aa5.86□□□□□ -1.47
SCFD1-214ENST00000554819 ZCCHC8Q6NZY4 707 aaKnown RBP5.86□□□□□ -1.47
SCFD1-214ENST00000554819 TTLL7Q6ZT98 887 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms