RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 PLA2G1BP04054 148 aaKnown RBP5.61□□□□□ -1.51
ATXN3-227ENST00000554491 CYBBP04839 570 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 IFNGR1P15260 489 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 ATF2P15336 505 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 SLURP1P55000 103 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 IRX3P78415 501 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-227ENST00000554491 NOL9Q5SY16 702 aaKnown RBP5.61□□□□□ -1.51
ATXN3-227ENST00000554491 PAQR3Q6TCH7 311 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 RUFY4Q6ZNE9 571 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 DBX2Q6ZNG2 339 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 LSRQ86X29 649 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-227ENST00000554491 FIBCD1Q8N539 461 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 PXDNQ92626 1479 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 FCRL3Q96P31 734 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-227ENST00000554491 THSD7AQ9UPZ6 1657 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 TBX22Q9Y458 520 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 ZNF451Q9Y4E5 1061 aa5.61□□□□□ -1.51
ATXN3-227ENST00000554491 KANK1Q14678 1352 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 SRGAP3O43295 1099 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 PFKLP17858 780 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 PRR5P85299 388 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 VWA3BQ502W6 1294 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 FNIP1Q8TF40 1166 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 ZNF830Q96NB3 372 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-227ENST00000554491 BDH2Q9BUT1 245 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 PDLIM7Q9NR12 457 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 TMEM51Q9NW97 253 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 SUSD2Q9UGT4 822 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 HDAC5Q9UQL6 1122 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 NOP58Q9Y2X3 529 aaKnown RBP5.6□□□□□ -1.51
ATXN3-227ENST00000554491 FHOD1Q9Y613 1164 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 CEP350Q5VT06 3117 aa5.6□□□□□ -1.51
ATXN3-227ENST00000554491 ADGRL2O95490 1459 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 KIF15Q9NS87 1388 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 A0A1W2PQJ5 194 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 F8W031 263 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-227ENST00000554491 TSPY4P0CV99 314 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 TSPY10P0CW01 314 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 CD247P20963 164 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 MC3RP41968 323 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 KCNC1P48547 511 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 RGS3P49796 1198 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 FOXO4P98177 505 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 OS9Q13438 667 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-227ENST00000554491 RTP5Q14D33 572 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 TARBP2Q15633 366 aaKnown RBP5.59□□□□□ -1.51
ATXN3-227ENST00000554491 ANKRD39Q53RE8 183 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 CYP2R1Q6VVX0 501 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 UNC5AQ6ZN44 842 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 KRT27Q7Z3Y8 459 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 TAB3Q8N5C8 712 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-227ENST00000554491 TMEM87AQ8NBN3 555 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 ZDHHC15Q96MV8 337 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 PTCHD1Q96NR3 888 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 FERD3LQ96RJ6 166 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 NOL6Q9H6R4 1146 aaKnown RBP5.59□□□□□ -1.51
ATXN3-227ENST00000554491 BCAS3Q9H6U6 928 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 RXFP1Q9HBX9 757 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 PPT2Q9UMR5 302 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 RGPD3A6NKT7 1758 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-227ENST00000554491 RGPD4Q7Z3J3 1758 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 SHANK3Q9BYB0 1731 aa5.59□□□□□ -1.51
ATXN3-227ENST00000554491 CDC42BPGQ6DT37 1551 aa5.59□□□□□ -1.52
ATXN3-227ENST00000554491 NEXMIFQ5QGS0 1516 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 PARD3Q8TEW0 1356 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 CD3EP07766 207 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 ZNF394Q53GI3 561 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 UTP14CQ5TAP6 766 aaKnown RBP5.58□□□□□ -1.52
ATXN3-227ENST00000554491 FBXW10Q5XX13 1052 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 LIPIQ6XZB0 460 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 UNC5CLQ8IV45 518 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 SMAP1Q8IYB5 467 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-227ENST00000554491 NLGN1Q8N2Q7 840 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 ZNF526Q8TF50 670 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-227ENST00000554491 SMARCC1Q92922 1105 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-227ENST00000554491 TM9SF2Q99805 663 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 SPATA25Q9BR10 227 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 FBLN5Q9UBX5 448 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 PPP1R1BQ9UD71 204 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-227ENST00000554491 PCDHGB7Q9Y5F8 929 aa5.58□□□□□ -1.52
ATXN3-227ENST00000554491 E9PCH4 1651 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 KIF1AQ12756 1690 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 CBFA2T2O43439 604 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 APPP05067 770 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 ADRB1P08588 477 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 IMPDH2P12268 514 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 NOP2P46087 812 aaKnown RBP5.57□□□□□ -1.52
ATXN3-227ENST00000554491 CAP1Q01518 475 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 PLP2Q04941 152 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 EFEMP1Q12805 493 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 PPP2R5DQ14738 602 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 TAF3Q5VWG9 929 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 MCMBPQ9BTE3 642 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 SLC52A1Q9NWF4 448 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 ZNF214Q9UL59 606 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-227ENST00000554491 PMF1-BGLAPU3KQ54 211 aa5.57□□□□□ -1.52
ATXN3-227ENST00000554491 LTBP3Q9NS15 1303 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 ASGR2P07307 311 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 GLI4P10075 376 aa5.56□□□□□ -1.52
ATXN3-227ENST00000554491 ITGA4P13612 1032 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms