RNA–Protein interactions for RNA: ENST00000553265.5

PRKCH-204, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-204ENST00000553265 MRC1P22897 1456 aa8.13□□□□□ -1.11
PRKCH-204ENST00000553265 NRXN2Q9P2S2 1712 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 TNRC6CQ9HCJ0 1690 aaKnown RBP8.12□□□□□ -1.11
PRKCH-204ENST00000553265 GRIA2P42262 883 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 PPP2R2AP63151 447 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 SQSTM1Q13501 440 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 YOD1Q5VVQ6 348 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-204ENST00000553265 LRRC47Q8N1G4 583 aaKnown RBP8.12□□□□□ -1.11
PRKCH-204ENST00000553265 PIWIL2Q8TC59 973 aaKnown RBP8.12□□□□□ -1.11
PRKCH-204ENST00000553265 ZNF526Q8TF50 670 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-204ENST00000553265 BTN2A2Q8WVV5 523 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 PSMD1Q99460 953 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 DUSP15Q9H1R2 295 aaPredicted RBP8.12□□□□□ -1.11
PRKCH-204ENST00000553265 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
PRKCH-204ENST00000553265 ARHGEF4Q9NR80 690 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 TMOD3Q9NYL9 352 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 ZSWIM5Q9P217 1185 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 POLKQ9UBT6 870 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 UBR2Q8IWV8 1755 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 TIAM2Q8IVF5 1701 aa8.12□□□□□ -1.11
PRKCH-204ENST00000553265 IQCA1LA6NCM1 817 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 NOP56O00567 594 aaKnown RBP8.11□□□□□ -1.11
PRKCH-204ENST00000553265 ADCY3O60266 1144 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 VAMP4O75379 141 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 KCNH1O95259 989 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 MMP10P09238 476 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 HMGB2P26583 209 aaKnown RBP8.11□□□□□ -1.11
PRKCH-204ENST00000553265 CTSKP43235 329 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 EIF4A2Q14240 407 aaKnown RBP8.11□□□□□ -1.11
PRKCH-204ENST00000553265 FOXB2Q5VYV0 432 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 SYTL5Q8TDW5 730 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-204ENST00000553265 THAP3Q8WTV1 239 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-204ENST00000553265 ZNF669Q96BR6 464 aaPredicted RBP8.11□□□□□ -1.11
PRKCH-204ENST00000553265 GPR62Q9BZJ7 368 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 FANCLQ9NW38 375 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 EMC9Q9Y3B6 208 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 SBF1O95248 1867 aa8.11□□□□□ -1.11
PRKCH-204ENST00000553265 AFDNP55196 1824 aaKnown RBP8.1□□□□□ -1.11
PRKCH-204ENST00000553265 SRFP11831 508 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 FOSL1P15407 271 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 CPSF6Q16630 551 aaKnown RBP eCLIP8.1□□□□□ -1.11
PRKCH-204ENST00000553265 DPY19L1Q2PZI1 675 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 TRIM59Q8IWR1 403 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 ARHGEF39Q8N4T4 335 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 NETO1Q8TDF5 533 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 UBE2FQ969M7 185 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 MRGPRX3Q96LB0 322 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 MKNK2Q9HBH9 465 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 GPR55Q9Y2T6 319 aaPredicted RBP8.1□□□□□ -1.11
PRKCH-204ENST00000553265 SCN7AQ01118 1682 aa8.1□□□□□ -1.11
PRKCH-204ENST00000553265 KCPQ6ZWJ8 1503 aa8.09□□□□□ -1.11
PRKCH-204ENST00000553265 CLSTN1O94985 981 aa8.09□□□□□ -1.11
PRKCH-204ENST00000553265 GYS1P13807 737 aa8.09□□□□□ -1.11
PRKCH-204ENST00000553265 TPP2P29144 1249 aaPredicted RBP8.09□□□□□ -1.11
PRKCH-204ENST00000553265 IFI16Q16666 785 aaKnown RBP8.09□□□□□ -1.11
PRKCH-204ENST00000553265 IFNL2Q8IZJ0 200 aa8.09□□□□□ -1.11
PRKCH-204ENST00000553265 TCTN2Q96GX1 697 aa8.09□□□□□ -1.11
PRKCH-204ENST00000553265 RCC1LQ96I51 464 aaKnown RBP8.09□□□□□ -1.11
PRKCH-204ENST00000553265 AARSD1Q9BTE6 412 aaKnown RBP8.09□□□□□ -1.11
PRKCH-204ENST00000553265 SEMA3GQ9NS98 782 aa8.09□□□□□ -1.11
PRKCH-204ENST00000553265 GPATCH2Q9NW75 528 aa8.09□□□□□ -1.11
PRKCH-204ENST00000553265 COL11A2P13942 1736 aaPredicted RBP8.09□□□□□ -1.11
PRKCH-204ENST00000553265 IGHA1P01876 353 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 CD3EP07766 207 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 L1CAMP32004 1257 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 CLCN7P51798 805 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 SF1Q15637 639 aaKnown RBP8.08□□□□□ -1.12
PRKCH-204ENST00000553265 GTF2IRD2BQ6EKJ0 949 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 GTF2IRD2Q86UP8 949 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 ZBTB38Q8NAP3 1195 aaPredicted RBP8.08□□□□□ -1.12
PRKCH-204ENST00000553265 SGSM3Q96HU1 749 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 EXOC2Q96KP1 924 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 MCMBPQ9BTE3 642 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 TRIT1Q9H3H1 467 aaKnown RBP8.08□□□□□ -1.12
PRKCH-204ENST00000553265 ATP13A1Q9HD20 1204 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 PRR13Q9NZ81 148 aa8.08□□□□□ -1.12
PRKCH-204ENST00000553265 SF3B6Q9Y3B4 125 aaKnown RBP8.08□□□□□ -1.12
PRKCH-204ENST00000553265 SIPA1L3O60292 1781 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-204ENST00000553265 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 A0A087WZG4 1122 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 TRAV20A0A0B4J274 112 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 ERVV-2B6SEH9 535 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 STXBP3O00186 592 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 FKTNO75072 461 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 CDC45O75419 566 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 CD96P40200 585 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 HSP90AA2PQ14568 343 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-204ENST00000553265 FAM209AQ5JX71 171 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 TSPYL5Q86VY4 417 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-204ENST00000553265 CERS3Q8IU89 383 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 CRACR2BQ8N4Y2 399 aaPredicted RBP8.07□□□□□ -1.12
PRKCH-204ENST00000553265 JMYQ8N9B5 988 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 DAGLBQ8NCG7 672 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 IER2Q9BTL4 223 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 TMEM260Q9NX78 707 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 DUSP13Q9UII6 198 aa8.07□□□□□ -1.12
PRKCH-204ENST00000553265 DIS3Q9Y2L1 958 aaKnown RBP8.07□□□□□ -1.12
PRKCH-204ENST00000553265 ANKRD31Q8N7Z5 1873 aa8.06□□□□□ -1.12
PRKCH-204ENST00000553265 USP42Q9H9J4 1324 aaKnown RBP8.06□□□□□ -1.12
PRKCH-204ENST00000553265 A0A0G2JLW4 131 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms