RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 NLRX1Q86UT6 975 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 DHX38Q92620 1227 aaKnown RBP22.07■■□□□ 1.12
PTCH1-227ENST00000553256 PPP1R12CQ9BZL4 782 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 HIPK3Q9H422 1215 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 MLXIPQ9HAP2 919 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 GTF2IRD1Q9UHL9 959 aa22.07■■□□□ 1.12
PTCH1-227ENST00000553256 IGLV3-22A0A075B6J6 115 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 M0R2N6 131 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 LGALS2P05162 132 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 SUPT20HL2P0C7V6 817 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 RBL2Q08999 1139 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 MFSD10Q14728 455 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 GPR153Q6NV75 609 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 SH3GLB2Q9NR46 395 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 KCNH7Q9NS40 1196 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 VPS54Q9P1Q0 977 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 HDAC6Q9UBN7 1215 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 DOCK5Q9H7D0 1870 aa22.06■■□□□ 1.12
PTCH1-227ENST00000553256 FAM86B1E9PN63 330 aa22.05■■□□□ 1.12
PTCH1-227ENST00000553256 EIF5BO60841 1220 aaKnown RBP22.05■■□□□ 1.12
PTCH1-227ENST00000553256 FAM86B2P0C5J1 330 aa22.05■■□□□ 1.12
PTCH1-227ENST00000553256 MTMR1Q13613 665 aa22.05■■□□□ 1.12
PTCH1-227ENST00000553256 KIAA0753Q2KHM9 967 aa22.05■■□□□ 1.12
PTCH1-227ENST00000553256 CEP55Q53EZ4 464 aa22.05■■□□□ 1.12
PTCH1-227ENST00000553256 TMEM240Q5SV17 173 aa22.05■■□□□ 1.12
PTCH1-227ENST00000553256 JAKMIP3Q5VZ66 844 aa22.05■■□□□ 1.12
PTCH1-227ENST00000553256 CDHR1Q96JP9 859 aa22.05■■□□□ 1.12
PTCH1-227ENST00000553256 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.05■■□□□ 1.12
PTCH1-227ENST00000553256 CDH23Q9H251 3354 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 GSTTP1A0A1W2PQM5 241 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 LARGE1O95461 756 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 ARP10275 920 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 ARHGAP4P98171 946 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 ST3GAL1Q11201 340 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 STK3Q13188 491 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 ITGB3BPQ13352 177 aaPredicted RBP22.04■■□□□ 1.12
PTCH1-227ENST00000553256 GPNMBQ14956 572 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 ME3Q16798 604 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 TRIM71Q2Q1W2 868 aaKnown RBP22.04■■□□□ 1.12
PTCH1-227ENST00000553256 NIPA1Q7RTP0 329 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 AIFM3Q96NN9 605 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 KATNAL1Q9BW62 490 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 C6orf50Q9HD87 102 aa22.04■■□□□ 1.12
PTCH1-227ENST00000553256 PITPNM1O00562 1244 aa22.03■■□□□ 1.12
PTCH1-227ENST00000553256 DEXIO95424 95 aa22.03■■□□□ 1.12
PTCH1-227ENST00000553256 PPIGQ13427 754 aaKnown RBP eCLIP22.03■■□□□ 1.12
PTCH1-227ENST00000553256 FAM47CQ5HY64 1035 aa22.03■■□□□ 1.12
PTCH1-227ENST00000553256 TRAF7Q6Q0C0 670 aa22.03■■□□□ 1.12
PTCH1-227ENST00000553256 TMEM199Q8N511 208 aa22.03■■□□□ 1.12
PTCH1-227ENST00000553256 GIMAP8Q8ND71 665 aaPredicted RBP22.03■■□□□ 1.12
PTCH1-227ENST00000553256 RASGRP4Q8TDF6 673 aa22.03■■□□□ 1.12
PTCH1-227ENST00000553256 CCDC12Q8WUD4 166 aaPredicted RBP22.03■■□□□ 1.12
PTCH1-227ENST00000553256 WNT8BQ93098 351 aa22.03■■□□□ 1.12
PTCH1-227ENST00000553256 LENG9Q96B70 501 aa22.03■■□□□ 1.12
PTCH1-227ENST00000553256 EHMT1Q9H9B1 1298 aa22.03■■□□□ 1.12
PTCH1-227ENST00000553256 H3BRB1 525 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 DHX15O43143 795 aaKnown RBP22.02■■□□□ 1.12
PTCH1-227ENST00000553256 FDPSP14324 419 aaKnown RBP22.02■■□□□ 1.12
PTCH1-227ENST00000553256 GNA11P29992 359 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 CIITAP33076 1130 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 CCL23P55773 120 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 ADAM17P78536 824 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 SSRP1Q08945 709 aaKnown RBP22.02■■□□□ 1.12
PTCH1-227ENST00000553256 TRIM50Q86XT4 487 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 FAM177A1Q8N128 213 aaPredicted RBP22.02■■□□□ 1.12
PTCH1-227ENST00000553256 REXO1Q8N1G1 1221 aaKnown RBP22.02■■□□□ 1.12
PTCH1-227ENST00000553256 DAGLBQ8NCG7 672 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 PCYT2Q99447 389 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 TUT1Q9H6E5 874 aaKnown RBP22.02■■□□□ 1.12
PTCH1-227ENST00000553256 AGO4Q9HCK5 861 aaKnown RBP22.02■■□□□ 1.12
PTCH1-227ENST00000553256 IL23AQ9NPF7 189 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 NFASCO94856 1347 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 STK36Q9NRP7 1315 aa22.02■■□□□ 1.12
PTCH1-227ENST00000553256 ZNF200P98182 395 aaPredicted RBP22.01■■□□□ 1.11
PTCH1-227ENST00000553256 AKAP17AQ02040 695 aaKnown RBP22.01■■□□□ 1.11
PTCH1-227ENST00000553256 ANKRD1Q15327 319 aa22.01■■□□□ 1.11
PTCH1-227ENST00000553256 PTGISQ16647 500 aa22.01■■□□□ 1.11
PTCH1-227ENST00000553256 MCTP2Q6DN12 878 aa22.01■■□□□ 1.11
PTCH1-227ENST00000553256 CCDC148Q8NFR7 591 aa22.01■■□□□ 1.11
PTCH1-227ENST00000553256 SCLYQ96I15 445 aa22.01■■□□□ 1.11
PTCH1-227ENST00000553256 ALG1Q9BT22 464 aa22.01■■□□□ 1.11
PTCH1-227ENST00000553256 DTNBO60941 627 aa22■■□□□ 1.11
PTCH1-227ENST00000553256 LGR5O75473 907 aa22■■□□□ 1.11
PTCH1-227ENST00000553256 ATG7O95352 703 aa22■■□□□ 1.11
PTCH1-227ENST00000553256 IQCF3P0C7M6 154 aa22■■□□□ 1.11
PTCH1-227ENST00000553256 ACRP10323 421 aa22■■□□□ 1.11
PTCH1-227ENST00000553256 ZNF365Q70YC5 407 aa22■■□□□ 1.11
PTCH1-227ENST00000553256 TRIM22Q8IYM9 498 aa22■■□□□ 1.11
PTCH1-227ENST00000553256 GTF3C6Q969F1 213 aa22■■□□□ 1.11
PTCH1-227ENST00000553256 SLKQ9H2G2 1235 aaPredicted RBP22■■□□□ 1.11
PTCH1-227ENST00000553256 CPLX1O14810 134 aa21.99■■□□□ 1.11
PTCH1-227ENST00000553256 RBM25P49756 843 aaKnown RBP21.99■■□□□ 1.11
PTCH1-227ENST00000553256 NEK4P51957 841 aa21.99■■□□□ 1.11
PTCH1-227ENST00000553256 C7orf31Q8N865 590 aa21.99■■□□□ 1.11
PTCH1-227ENST00000553256 SEPT1Q8WYJ6 367 aa21.99■■□□□ 1.11
PTCH1-227ENST00000553256 HERVK_113Q902F9 699 aa21.99■■□□□ 1.11
PTCH1-227ENST00000553256 RNPEPQ9H4A4 650 aa21.99■■□□□ 1.11
PTCH1-227ENST00000553256 PCDHA4Q9UN74 947 aa21.99■■□□□ 1.11
PTCH1-227ENST00000553256 TANC1Q9C0D5 1861 aa21.98■■□□□ 1.11
PTCH1-227ENST00000553256 CHD9Q3L8U1 2897 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms