RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 CMTR1Q8N1G2 835 aaKnown RBP22.86■■□□□ 1.25
GCN1-207ENST00000550471 CCDC82Q8N4S0 544 aa22.86■■□□□ 1.25
GCN1-207ENST00000550471 VWCEQ96DN2 955 aa22.86■■□□□ 1.25
GCN1-207ENST00000550471 CTAGE1Q96RT6 745 aa22.86■■□□□ 1.25
GCN1-207ENST00000550471 GPR20Q99678 358 aa22.86■■□□□ 1.25
GCN1-207ENST00000550471 RIC8AQ9NPQ8 531 aa22.86■■□□□ 1.25
GCN1-207ENST00000550471 CNTNAP5Q8WYK1 1306 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 KLF18A0A0U1RQI7 1052 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 ABHD14A-ACY1A0A1B0GW23 586 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 RPLP2P05387 115 aaKnown RBP22.85■■□□□ 1.25
GCN1-207ENST00000550471 HOXC8P31273 242 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 PBX2P40425 430 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 NAPAP54920 295 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 AP3B2Q13367 1082 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 MTMR1Q13613 665 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 ADCK5Q3MIX3 580 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 SERINC5Q86VE9 423 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 CCDC12Q8WUD4 166 aaPredicted RBP22.85■■□□□ 1.25
GCN1-207ENST00000550471 PCDHA6Q9UN73 950 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 PCDHA8Q9Y5H6 950 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 UBIAD1Q9Y5Z9 338 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 TANC1Q9C0D5 1861 aa22.85■■□□□ 1.25
GCN1-207ENST00000550471 ADCY7P51828 1080 aa22.84■■□□□ 1.25
GCN1-207ENST00000550471 SEMA3FQ13275 785 aa22.84■■□□□ 1.25
GCN1-207ENST00000550471 DHX38Q92620 1227 aaKnown RBP22.84■■□□□ 1.25
GCN1-207ENST00000550471 GPKOWQ92917 476 aaPredicted RBP eCLIP22.84■■□□□ 1.25
GCN1-207ENST00000550471 ATP6V0A1Q93050 837 aa22.84■■□□□ 1.25
GCN1-207ENST00000550471 JADE2Q9NQC1 790 aa22.84■■□□□ 1.25
GCN1-207ENST00000550471 BARHL2Q9NY43 387 aa22.84■■□□□ 1.25
GCN1-207ENST00000550471 BRPF3Q9ULD4 1205 aa22.84■■□□□ 1.25
GCN1-207ENST00000550471 V9GY48 417 aaPredicted RBP22.84■■□□□ 1.25
GCN1-207ENST00000550471 METAP2P50579 478 aaKnown RBP eCLIP22.83■■□□□ 1.25
GCN1-207ENST00000550471 ERICH6BQ5W0A0 696 aa22.83■■□□□ 1.25
GCN1-207ENST00000550471 PPP2R2DQ66LE6 453 aa22.83■■□□□ 1.25
GCN1-207ENST00000550471 WWC2Q6AWC2 1192 aa22.83■■□□□ 1.25
GCN1-207ENST00000550471 SEPT1Q8WYJ6 367 aa22.83■■□□□ 1.25
GCN1-207ENST00000550471 NKX2-4Q9H2Z4 354 aa22.83■■□□□ 1.25
GCN1-207ENST00000550471 NRCAMQ92823 1304 aa22.82■■□□□ 1.24
GCN1-207ENST00000550471 SMIM10L2AP0DMW4 78 aa22.82■■□□□ 1.24
GCN1-207ENST00000550471 SMIM10L2BP0DMW5 78 aa22.82■■□□□ 1.24
GCN1-207ENST00000550471 FUT2Q10981 343 aa22.82■■□□□ 1.24
GCN1-207ENST00000550471 IKBKEQ14164 716 aa22.82■■□□□ 1.24
GCN1-207ENST00000550471 TRIM71Q2Q1W2 868 aaKnown RBP22.82■■□□□ 1.24
GCN1-207ENST00000550471 SKAP1Q86WV1 359 aa22.82■■□□□ 1.24
GCN1-207ENST00000550471 RAB11FIP4Q86YS3 637 aa22.82■■□□□ 1.24
GCN1-207ENST00000550471 ZFP91Q96JP5 570 aaPredicted RBP22.82■■□□□ 1.24
GCN1-207ENST00000550471 JAKMIP1Q96N16 626 aaKnown RBP22.82■■□□□ 1.24
GCN1-207ENST00000550471 NID2Q14112 1375 aa22.81■■□□□ 1.24
GCN1-207ENST00000550471 RSPH10B2B2RC85 870 aa22.81■■□□□ 1.24
GCN1-207ENST00000550471 DLL1O00548 723 aa22.81■■□□□ 1.24
GCN1-207ENST00000550471 RSPH10BP0C881 870 aa22.81■■□□□ 1.24
GCN1-207ENST00000550471 KCNA2P16389 499 aa22.81■■□□□ 1.24
GCN1-207ENST00000550471 ITGB5P18084 799 aa22.81■■□□□ 1.24
GCN1-207ENST00000550471 COL9A3Q14050 684 aaPredicted RBP22.81■■□□□ 1.24
GCN1-207ENST00000550471 HERC6Q8IVU3 1022 aa22.81■■□□□ 1.24
GCN1-207ENST00000550471 PPP1R13LQ8WUF5 828 aa22.81■■□□□ 1.24
GCN1-207ENST00000550471 ERAP1Q9NZ08 941 aa22.81■■□□□ 1.24
GCN1-207ENST00000550471 hCG_1642624A0A1W2PR95 340 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 ESYT2A0FGR8 921 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 SMCO2A6NFE2 343 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 SORBS3O60504 671 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 AKAP17AQ02040 695 aaKnown RBP22.8■■□□□ 1.24
GCN1-207ENST00000550471 UBE2SQ16763 222 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 PFKFB3Q16875 520 aaPredicted RBP22.8■■□□□ 1.24
GCN1-207ENST00000550471 ZNF618Q5T7W0 954 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 Q6ZUG5 572 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 TCEANC2Q96MN5 208 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 MXRA8Q9BRK3 442 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 AGXT2Q9BYV1 514 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 RNPEPQ9H4A4 650 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 SMARCAD1Q9H4L7 1026 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 NAP1L2Q9ULW6 460 aaPredicted RBP22.8■■□□□ 1.24
GCN1-207ENST00000550471 YBX2Q9Y2T7 364 aaKnown RBP22.8■■□□□ 1.24
GCN1-207ENST00000550471 SNX14Q9Y5W7 946 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 NFASCO94856 1347 aa22.8■■□□□ 1.24
GCN1-207ENST00000550471 STXBP3O00186 592 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 EIF5BO60841 1220 aaKnown RBP22.79■■□□□ 1.24
GCN1-207ENST00000550471 LGR5O75473 907 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 RPS6KB1P23443 525 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 GNA11P29992 359 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 TCF7P36402 384 aaPredicted RBP22.79■■□□□ 1.24
GCN1-207ENST00000550471 THPOP40225 353 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 TAF2Q6P1X5 1199 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 NIPA1Q7RTP0 329 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 RSPH3Q86UC2 560 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 SDF4Q9BRK5 362 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 PRDM12Q9H4Q4 367 aa22.79■■□□□ 1.24
GCN1-207ENST00000550471 TRIP12Q14669 1992 aaPredicted RBP22.78■■□□□ 1.24
GCN1-207ENST00000550471 NBNO60934 754 aa22.78■■□□□ 1.24
GCN1-207ENST00000550471 SCG2P13521 617 aa22.78■■□□□ 1.24
GCN1-207ENST00000550471 RABGGTBP53611 331 aa22.78■■□□□ 1.24
GCN1-207ENST00000550471 WDR5P61964 334 aaKnown RBP22.78■■□□□ 1.24
GCN1-207ENST00000550471 CEP55Q53EZ4 464 aa22.78■■□□□ 1.24
GCN1-207ENST00000550471 UTP14CQ5TAP6 766 aaKnown RBP22.78■■□□□ 1.24
GCN1-207ENST00000550471 FAM43BQ6ZT52 329 aaPredicted RBP22.78■■□□□ 1.24
GCN1-207ENST00000550471 RPAINQ86UA6 219 aa22.78■■□□□ 1.24
GCN1-207ENST00000550471 BICD2Q8TD16 824 aa22.78■■□□□ 1.24
GCN1-207ENST00000550471 BRF1Q92994 677 aa22.78■■□□□ 1.24
GCN1-207ENST00000550471 ANO3Q9BYT9 981 aa22.78■■□□□ 1.24
GCN1-207ENST00000550471 AZI2Q9H6S1 392 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms