RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 CROTQ9UKG9 612 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 COA3Q9Y2R0 106 aaPredicted RBP4.44□□□□□ -1.7
CCNT1-203ENST00000550457 PCDHB4Q9Y5E5 795 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 PCDHA2Q9Y5H9 948 aa4.44□□□□□ -1.7
CCNT1-203ENST00000550457 TOP2AP11388 1531 aaKnown RBP4.43□□□□□ -1.7
CCNT1-203ENST00000550457 H7BY64 318 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 MYO1BO43795 1136 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 CAPNS1P04632 268 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 LTBRP36941 435 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 ZNF585AQ6P3V2 769 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 TMC5Q6UXY8 1006 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 CIR1Q86X95 450 aaPredicted RBP4.43□□□□□ -1.7
CCNT1-203ENST00000550457 PROSER1Q86XN7 944 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 ZFPM1Q8IX07 1006 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 PPIL6Q8IXY8 311 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 TMEM145Q8NBT3 493 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 MEGF9Q9H1U4 602 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 SOGA1O94964 1423 aa4.43□□□□□ -1.7
CCNT1-203ENST00000550457 PATE3B3GLJ2 98 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 SMAD7O15105 426 aaKnown RBP4.42□□□□□ -1.7
CCNT1-203ENST00000550457 DEKP35659 375 aaKnown RBP4.42□□□□□ -1.7
CCNT1-203ENST00000550457 GDF5P43026 501 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 HMGA2P52926 109 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 MFAP1P55081 439 aaKnown RBP4.42□□□□□ -1.7
CCNT1-203ENST00000550457 GFRA1P56159 465 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 LSAMPQ13449 338 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 CHRNA2Q15822 529 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 SV2CQ496J9 727 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 PHF19Q5T6S3 580 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 MRM1Q6IN84 353 aaKnown RBP4.42□□□□□ -1.7
CCNT1-203ENST00000550457 FAM178BQ8IXR5 827 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 PALM2Q8IXS6 379 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 MICAL1Q8TDZ2 1067 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 TMEM209Q96SK2 561 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 MRIQ9BWK5 157 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 CLDND1Q9NY35 253 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 RRBP1Q9P2E9 1410 aaKnown RBP4.42□□□□□ -1.7
CCNT1-203ENST00000550457 MYOTQ9UBF9 498 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 STRIP2Q9ULQ0 834 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 CECR2Q9BXF3 1484 aa4.42□□□□□ -1.7
CCNT1-203ENST00000550457 ANP32CO43423 234 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 SUSD5O60279 629 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 B4GALT4O60513 344 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 AMHP03971 560 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 KCNJ6P48051 423 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 NFATC3Q12968 1075 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 SLC35F1Q5T1Q4 408 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 TRMT10BQ6PF06 316 aaKnown RBP4.41□□□□□ -1.7
CCNT1-203ENST00000550457 ARHGEF18Q6ZSZ5 1173 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 KLHL36Q8N4N3 616 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 NUDT10Q8NFP7 164 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 NUDT11Q96G61 164 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 CHAMP1Q96JM3 812 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 CCDC140Q96MF4 163 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 VPS11Q9H270 941 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 HSPBP1Q9NZL4 362 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 LRP2BPQ9P2M1 347 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 INPP5FQ9Y2H2 1132 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 NPFFR2Q9Y5X5 522 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 MRVI1Q9Y6F6 885 aa4.41□□□□□ -1.7
CCNT1-203ENST00000550457 CYR61O00622 381 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 DGKIO75912 1065 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 KLHL18O94889 574 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 CPP00450 1065 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 ATF4P18848 351 aaPredicted RBP4.4□□□□□ -1.71
CCNT1-203ENST00000550457 GRIA2P42262 883 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 SPDYAQ5MJ70 313 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 LARP1BQ659C4 914 aaKnown RBP4.4□□□□□ -1.71
CCNT1-203ENST00000550457 SLFN13Q68D06 897 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 Q8TCH9 128 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 CDK5RAP1Q96SZ6 601 aaKnown RBP4.4□□□□□ -1.71
CCNT1-203ENST00000550457 TGIF2Q9GZN2 237 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 DEF6Q9H4E7 631 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 EPB41L1Q9H4G0 881 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 JADE2Q9NQC1 790 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 KIAA1522Q9P206 1035 aaPredicted RBP4.4□□□□□ -1.71
CCNT1-203ENST00000550457 USP35Q9P2H5 1018 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 PPARGC1AQ9UBK2 798 aaKnown RBP4.4□□□□□ -1.71
CCNT1-203ENST00000550457 ASH2LQ9UBL3 628 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 FTSJ1Q9UET6 329 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 ADAM29Q9UKF5 820 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 ZDHHC9Q9Y397 364 aa4.4□□□□□ -1.71
CCNT1-203ENST00000550457 WIZO95785 1651 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 OVOL3O00110 214 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 MSCO60682 206 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 ZNF623O75123 536 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 CYP7B1O75881 506 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 CNOT4O95628 575 aaKnown RBP4.39□□□□□ -1.71
CCNT1-203ENST00000550457 SELENOPP49908 381 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 GRIN1Q05586 938 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 RBM12BQ8IXT5 1001 aaKnown RBP4.39□□□□□ -1.71
CCNT1-203ENST00000550457 DTX3Q8N9I9 347 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 PIP4K2CQ8TBX8 421 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 PHOSPHO1Q8TCT1 267 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 CLEC4DQ8WXI8 215 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 WRNIP1Q96S55 665 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 JAM3Q9BX67 310 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 PCED1AQ9H1Q7 454 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 SMOC1Q9H4F8 434 aa4.39□□□□□ -1.71
CCNT1-203ENST00000550457 ACTR10Q9NZ32 417 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms