RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 FAM153BP0C7A2 387 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 HNRNPH3P31942 346 aaKnown RBP13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 IRAK1P51617 712 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 FAM153CQ494X1 144 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 CFAP221Q4G0U5 840 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 GPBP1Q86WP2 473 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 ADGRF4Q8IZF3 695 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 CCDC43Q96MW1 224 aaKnown RBP13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 FAM153AQ9UHL3 310 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 CNTNAP4Q9C0A0 1308 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 STRCQ7RTU9 1775 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 GPR75-ASB3A0A0A6YYF3 556 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 USP17L10C9JJH3 530 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 ACTN1P12814 892 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 KLHL30Q0D2K2 578 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 PDCLQ13371 301 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 HGSNATQ68CP4 663 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 MXD3Q9BW11 206 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 MTMR4Q9NYA4 1195 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 GGA1Q9UJY5 639 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 COL22A1Q8NFW1 1626 aaPredicted RBP13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 IRS2Q9Y4H2 1338 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 A0A087X0T9 212 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 MEIS1O00470 390 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 FAM228BP0C875 321 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 SCNN1DP51172 638 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 EPHB4P54760 987 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 RHBDL3P58872 404 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 TCERG1LQ5VWI1 586 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 MICALL1Q8N3F8 863 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 RIOX1Q9H6W3 641 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 JMJD4Q9H9V9 463 aa13.15□□□□□ -0.3
RAPGEF3-219ENST00000549151 COL16A1Q07092 1604 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 FAM196BA6NMK8 535 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 SNAP25P60880 206 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 HLTFQ14527 1009 aaKnown RBP eCLIP13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 TRAPPC3LQ5T215 181 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 NGLY1Q96IV0 654 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 PPP1R11O60927 126 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 RPS6KA5O75582 802 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 LIG3P49916 1009 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 ADAM9Q13443 819 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 HAS1Q92839 578 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 DNAJC19Q96DA6 116 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 ZIM3Q96PE6 472 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 PSTPIP2Q9H939 334 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 OPA1O60313 960 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 DCAF17Q5H9S7 520 aaPredicted RBP13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 FAM196AQ6ZSG2 479 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 FAM107BQ9H098 131 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 RIC8AQ9NPQ8 531 aa13.14□□□□□ -0.31
RAPGEF3-219ENST00000549151 POTEFA5A3E0 1075 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 NOL4O94818 638 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 PLA2G4BP0C869 781 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 POTEIP0CG38 1075 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 PLCG2P16885 1265 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 TTMPQ5BVD1 217 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 POTEGQ6S5H5 508 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 CUL5Q93034 780 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 SPAG5Q96R06 1193 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 CEP72Q9P209 647 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 EBAG9O00559 213 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 KCNK3O14649 394 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 SERPING1P05155 500 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 PPFIA1Q13136 1202 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 TTC31Q49AM3 519 aaPredicted RBP13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 MAATS1Q7Z4T9 603 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 CCDC65Q8IXS2 484 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 EMILIN3Q9NT22 766 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 DAGLAQ9Y4D2 1042 aa13.13□□□□□ -0.31
RAPGEF3-219ENST00000549151 TMCO5BA8MYB1 307 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 TAL1P17542 331 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 PDIA5Q14554 519 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 ASIC2Q16515 512 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 IFT20Q8IY31 132 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 DHX37Q8IY37 1157 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 LUC7LQ9NQ29 371 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 ATP6V0A2Q9Y487 856 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 ESYT2A0FGR8 921 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 SHTN1A0MZ66 631 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 SLC9A1P19634 815 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 NR2F2P24468 414 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 MAGEA9P43362 315 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 MRPL12P52815 198 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 PABPC4Q13310 644 aaKnown RBP eCLIP13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 NNTQ13423 1086 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 ASTE1Q2TB18 679 aaPredicted RBP13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 TAF4BQ92750 862 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 LRRC27Q9C0I9 530 aa13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 DDX4Q9NQI0 724 aaKnown RBP13.12□□□□□ -0.31
RAPGEF3-219ENST00000549151 POLLQ9UGP5 575 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms