RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 LRGUKQ96M69 825 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 NKX2-4Q9H2Z4 354 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 ZNF180Q9UJW8 692 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 SMG6Q86US8 1419 aaKnown RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 RTL1A6NKG5 1358 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 SPATA31A5Q5VU36 1347 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 SPATA31A7Q8IWB4 1347 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 NRAPQ86VF7 1730 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 COL3A1P02461 1466 aaPredicted RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 WDR64B1ANS9 1081 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 LEFTY1O75610 366 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 PRKD3O94806 890 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 PRAMEF1O95521 474 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 THBDP07204 575 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 PYGMP11217 842 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 ZNF143P52747 638 aaPredicted RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 PIN1Q13526 163 aaPredicted RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 VPS72Q15906 364 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 NBPF9Q3BBW0 867 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 SGO2Q562F6 1265 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 ZC3H12BQ5HYM0 836 aaKnown RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 KSR2Q6VAB6 950 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 CISD2Q8N5K1 135 aaKnown RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 CCDC136Q96JN2 1154 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 CFAP53Q96M91 514 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 PHF20Q9BVI0 1012 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.75□□□□□ -1.65
APAF1-208ENST00000549007 THG1LQ9NWX6 298 aaKnown RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 TRPC5Q9UL62 973 aaPredicted RBP4.75□□□□□ -1.65
APAF1-208ENST00000549007 SPATA31A1Q5TZJ5 1347 aa4.75□□□□□ -1.65
APAF1-208ENST00000549007 TIAF1O95411 115 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 MYBP10242 640 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 MYBL2P10244 700 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 GLB1P16278 677 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 CTSKP43235 329 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 BIRC2Q13490 618 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 ZNF772Q68DY9 489 aaPredicted RBP4.74□□□□□ -1.65
APAF1-208ENST00000549007 PPP4R4Q6NUP7 873 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 PPIL6Q8IXY8 311 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 FAM9BQ8IZU0 186 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 TTC8Q8TAM2 541 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 SPTLC3Q9NUV7 552 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 PPARGC1AQ9UBK2 798 aaKnown RBP4.74□□□□□ -1.65
APAF1-208ENST00000549007 CEP131Q9UPN4 1083 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 LUC7L2Q9Y383 392 aaKnown RBP4.74□□□□□ -1.65
APAF1-208ENST00000549007 ATRNO75882 1429 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 BLMP54132 1417 aaPredicted RBP4.74□□□□□ -1.65
APAF1-208ENST00000549007 CRB1P82279 1406 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 LRIG2O94898 1065 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 CBX7O95931 251 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 GLI3P10071 1580 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 PMLP29590 882 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 IQSEC1Q6DN90 963 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 ZCCHC8Q6NZY4 707 aaKnown RBP4.74□□□□□ -1.65
APAF1-208ENST00000549007 POMZP3Q6PJE2 187 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 TCP11L2Q8N4U5 519 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 MEGF6O75095 1541 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 RXRBP28702 533 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 HNRNPUQ00839 825 aaKnown RBP eCLIP4.74□□□□□ -1.65
APAF1-208ENST00000549007 AMPD2Q01433 879 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 ZC3H7AQ8IWR0 971 aaKnown RBP4.74□□□□□ -1.65
APAF1-208ENST00000549007 TOP6BLQ8N6T0 577 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 PLVAPQ9BX97 442 aa4.74□□□□□ -1.65
APAF1-208ENST00000549007 ASLP04424 464 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 HP1BP3Q5SSJ5 553 aaPredicted RBP4.73□□□□□ -1.65
APAF1-208ENST00000549007 SLC35F1Q5T1Q4 408 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 ILDR2Q71H61 639 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.73□□□□□ -1.65
APAF1-208ENST00000549007 SPATS2Q86XZ4 545 aaKnown RBP4.73□□□□□ -1.65
APAF1-208ENST00000549007 RHOBTB2Q9BYZ6 727 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 CYP26B1Q9NR63 512 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 CLEC1BQ9P126 229 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 FBXL7Q9UJT9 491 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 RRP7AQ9Y3A4 280 aaKnown RBP4.73□□□□□ -1.65
APAF1-208ENST00000549007 NWD2Q9ULI1 1742 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 KRT37O76014 449 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 SOD2P04179 222 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 PRKAR2BP31323 418 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 LCE2CQ5TA81 110 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 KREMEN2Q8NCW0 462 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 SMARCC1Q92922 1105 aaPredicted RBP4.73□□□□□ -1.65
APAF1-208ENST00000549007 RCC1LQ96I51 464 aaKnown RBP4.73□□□□□ -1.65
APAF1-208ENST00000549007 PHACTR3Q96KR7 559 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 Q96M66 194 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 CDH19Q9H159 772 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 TMX1Q9H3N1 280 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 IFT22Q9H7X7 185 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 ADAMTS8Q9UP79 889 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 IGSF1Q8N6C5 1336 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 RGS12O14924 1447 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 VSTM5A8MXK1 200 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 ZSCAN20P17040 1043 aaPredicted RBP4.73□□□□□ -1.65
APAF1-208ENST00000549007 SCNN1BP51168 640 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 USP11P51784 963 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 RBM6P78332 1123 aaKnown RBP4.73□□□□□ -1.65
APAF1-208ENST00000549007 MAP7Q14244 749 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 WDR43Q15061 677 aaKnown RBP eCLIP4.73□□□□□ -1.65
APAF1-208ENST00000549007 MBLAC2Q68D91 279 aa4.73□□□□□ -1.65
APAF1-208ENST00000549007 JPH3Q8WXH2 748 aaPredicted RBP4.73□□□□□ -1.65
APAF1-208ENST00000549007 RAPGEF4Q8WZA2 1011 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms