RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 CDK5RAP2Q96SN8 1893 aa15.58■□□□□ 0.09
RAPGEF3-218ENST00000548919 A0A087WUV0 522 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 RBAK-RBAKDNI3L0D1 243 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 SERPING1P05155 500 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 FKBP3Q00688 224 aaKnown RBP15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 KIAA0753Q2KHM9 967 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 TMEM119Q4V9L6 283 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 CERS3Q8IU89 383 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 PROCA1Q8NCQ7 364 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 CASKIN2Q8WXE0 1202 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 KAT2BQ92831 832 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 RIOX1Q9H6W3 641 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 GDF3Q9NR23 364 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 GNPATO15228 680 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 TNFRSF8P28908 595 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 GUCY1A3Q02108 690 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 NAB2Q15742 525 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 CFAP58Q5T655 872 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 PIK3R5Q8WYR1 880 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 HAS1Q92839 578 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 RAB34Q9BZG1 259 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 RIC8AQ9NPQ8 531 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 ATP6V0A2Q9Y487 856 aa15.58■□□□□ 0.08
RAPGEF3-218ENST00000548919 E9PMD0 336 aa15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 PDIA5Q14554 519 aa15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 FAM26FQ5R3K3 315 aa15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 KLHL7Q8IXQ5 586 aa15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 IQCKQ8N0W5 287 aa15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 RNPC3Q96LT9 517 aaKnown RBP15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 ESYT2A0FGR8 921 aa15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 NDUFAB1O14561 156 aa15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 LDHCP07864 332 aa15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 ICE2Q659A1 982 aa15.57■□□□□ 0.08
RAPGEF3-218ENST00000548919 GOLGB1Q14789 3259 aaKnown RBP15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 MARCH6O60337 910 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 PPP1R11O60927 126 aaPredicted RBP15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 ERLIN2O94905 339 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 NT5C2P49902 561 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 SKOR1P84550 965 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 PSMD2Q13200 908 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 GLE1Q53GS7 698 aaKnown RBP15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 MEI1Q5TIA1 1274 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 DDX25Q9UHL0 483 aaKnown RBP15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 THRAP3Q9Y2W1 955 aaKnown RBP15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 GRID2IPA4D2P6 1211 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 ACTN1P12814 892 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 KLHL30Q0D2K2 578 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 SLC18A3Q16572 532 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 ZNF804AQ7Z570 1209 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 PROM2Q8N271 834 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 EDEM3Q9BZQ6 932 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 TSKSQ9UJT2 592 aa15.56■□□□□ 0.08
RAPGEF3-218ENST00000548919 TNRC6CQ9HCJ0 1690 aaKnown RBP15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 RAD51CO43502 376 aa15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 PAK2Q13177 524 aa15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 ORC2Q13416 577 aaPredicted RBP15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 FBXW10Q5XX13 1052 aa15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 TTBK2Q6IQ55 1244 aa15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 INPP4AQ96PE3 977 aaPredicted RBP15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 ZHX3Q9H4I2 956 aa15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 KIAA1024Q9UPX6 916 aa15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 CPP00450 1065 aa15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 SLC16A2P36021 539 aa15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 PICALMQ13492 652 aa15.55■□□□□ 0.08
RAPGEF3-218ENST00000548919 MYH4Q9Y623 1939 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 GPR75-ASB3A0A0A6YYF3 556 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 RHBDL3P58872 404 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 HERC4Q5GLZ8 1057 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 TRIM59Q8IWR1 403 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 PCDHGC5Q9Y5F6 944 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 POTEB3A0JP26 581 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 POTECB2RU33 542 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 KCNK3O14649 394 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 AKR1B1P15121 316 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 SMARCA1P28370 1054 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 GTF2A1P52655 376 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 POTEBQ6S5H4 581 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 SCFD1Q8WVM8 642 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 FAM107BQ9H098 131 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 CENPHQ9H3R5 247 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 MTMR4Q9NYA4 1195 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 PCDHA12Q9UN75 941 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 LEMD3Q9Y2U8 911 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 PCDHA2Q9Y5H9 948 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 MYH7BA7E2Y1 1941 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 SPATA31A5Q5VU36 1347 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 SPATA31A7Q8IWB4 1347 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 CNTNAP4Q9C0A0 1308 aa15.54■□□□□ 0.08
RAPGEF3-218ENST00000548919 LSP1P33241 339 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 EPS15P42566 896 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 GPSM2P81274 684 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 PTK2Q05397 1052 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 CDC37Q16543 378 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 DPP8Q6V1X1 898 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 ADGRF4Q8IZF3 695 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 IPO4Q8TEX9 1081 aaKnown RBP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 SYN2Q92777 582 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 JMJD4Q9H9V9 463 aa15.53■□□□□ 0.08
RAPGEF3-218ENST00000548919 CD209Q9NNX6 404 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms