RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TNNC1P63316 161 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 COASYQ13057 564 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 LRRC41Q15345 812 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 KCNK18Q7Z418 384 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 NBPF5PQ86XG9 351 aaPredicted RBP10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 TRIM59Q8IWR1 403 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 PIK3R5Q8WYR1 880 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 CEP95Q96GE4 821 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 NUDT12Q9BQG2 462 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 LSM14BQ9BX40 385 aaKnown RBP10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 NARFQ9UHQ1 456 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 SAP30BPQ9UHR5 308 aaKnown RBP10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 TMEM59LQ9UK28 342 aa10.88□□□□□ -0.67
SMARCD1-205ENST00000548573 HMGB1P1B2RPK0 211 aaPredicted RBP10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 FAM153BP0C7A2 387 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 GUCY2CP25092 1073 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 LIG3P49916 1009 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 POLR2FP61218 127 aaKnown RBP10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 PDCLQ13371 301 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 FAM153CQ494X1 144 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 FAM26FQ5R3K3 315 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 HYIQ5T013 277 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 C10orf76Q5T2E6 689 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 PPP1R18Q6NYC8 613 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 TPTE2Q6XPS3 522 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 USP38Q8NB14 1042 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 GLIS3Q8NEA6 775 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 CASKIN2Q8WXE0 1202 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 IFT81Q8WYA0 676 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 TBC1D5Q92609 795 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 KRT12Q99456 494 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 EPN3Q9H201 632 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 YY1AP1Q9H869 796 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 BMP2KQ9NSY1 1161 aaPredicted RBP10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 PANK4Q9NVE7 773 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 FAM153AQ9UHL3 310 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 CDK5RAP2Q96SN8 1893 aa10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 TNRC6CQ9HCJ0 1690 aaKnown RBP10.87□□□□□ -0.67
SMARCD1-205ENST00000548573 GPR75-ASB3A0A0A6YYF3 556 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 USP17L5A8MUK1 530 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 FTCDO95954 541 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 PDHBP11177 359 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 PLCG2P16885 1265 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 LSP1P33241 339 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 HSPA9P38646 679 aaKnown RBP10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 GRIK5Q16478 980 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 KIAA0753Q2KHM9 967 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 ASPRV1Q53RT3 343 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 TTC19Q6DKK2 380 aaPredicted RBP10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 MICALCLQ6ZW33 695 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 TMC4Q7Z404 712 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 YTHDF3Q7Z739 585 aaKnown RBP10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 NRAPQ86VF7 1730 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 ZC3H3Q8IXZ2 948 aaKnown RBP10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 SH2D3CQ8N5H7 860 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 ATP6V1G3Q96LB4 118 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 RNPC3Q96LT9 517 aaKnown RBP10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 CEP89Q96ST8 783 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 UBA5Q9GZZ9 404 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 NT5C3AQ9H0P0 336 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 KDM3AQ9Y4C1 1321 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 NHSQ6T4R5 1651 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 PLIN4Q96Q06 1357 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 A0A087X0T9 212 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 ESYT3A0FGR9 886 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 ZSCAN5CA6NGD5 496 aaPredicted RBP10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 SLC26A4O43511 780 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 FAM228BP0C875 321 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 ERCC3P19447 782 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 NR1D1P20393 614 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 USP8P40818 1118 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 BTDP43251 543 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 KLHL30Q0D2K2 578 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 ASIC2Q16515 512 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 SWT1Q5T5J6 900 aaKnown RBP10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 KCTD16Q68DU8 428 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 LRIG3Q6UXM1 1119 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 C15orf52Q6ZUT6 534 aaKnown RBP10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 ZNF804AQ7Z570 1209 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 GPIHBP1Q8IV16 184 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 CCDC65Q8IXS2 484 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 KAT2BQ92831 832 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 ISCUQ9H1K1 167 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 GGA2Q9UJY4 613 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 SAMM50Q9Y512 469 aa10.86□□□□□ -0.67
SMARCD1-205ENST00000548573 MEFVO15553 781 aaPredicted RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 PPP1R37O75864 691 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 KIAA0754O94854 1291 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 SNHG28P0DPA3 235 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 GCFC2P16383 781 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 ATP1A2P50993 1020 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 CUL1Q13616 776 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 RAPGEF1Q13905 1077 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 ECM1Q16610 540 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 IFI16Q16666 785 aaKnown RBP10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 PPP4R3CPQ6ZMV5 832 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 TEX11Q8IYF3 940 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 CNPY4Q8N129 248 aa10.85□□□□□ -0.67
SMARCD1-205ENST00000548573 TAF4BQ92750 862 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms