RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CNOT6LQ96LI5 555 aaKnown RBP23.3■■□□□ 1.32
RITA1-201ENST00000548278 AS3MTQ9HBK9 375 aa23.3■■□□□ 1.32
RITA1-201ENST00000548278 PCDHA2Q9Y5H9 948 aa23.3■■□□□ 1.32
RITA1-201ENST00000548278 FRMD3A2A2Y4 597 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 MFAP3LO75121 409 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 CASP14P31944 242 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 LRRC41Q15345 812 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 FAM26FQ5R3K3 315 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 LRCH2Q5VUJ6 765 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 FOXR2Q6PJQ5 311 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 MCF2L2Q86YR7 1114 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 MB21D1Q8N884 522 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 SYT2Q8N9I0 419 aaPredicted RBP23.29■■□□□ 1.32
RITA1-201ENST00000548278 CPLX3Q8WVH0 158 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 SPON1Q9HCB6 807 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 RABGAP1Q9Y3P9 1069 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 PPP2R3BQ9Y5P8 575 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 PITPNM2Q9BZ72 1349 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 PHIPQ8WWQ0 1821 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 ALAS1P13196 640 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 FXR1P51114 621 aaKnown RBP eCLIP23.29■■□□□ 1.32
RITA1-201ENST00000548278 SLC30A10Q6XR72 485 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 HSD17B14Q9BPX1 270 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 TUBGCP2Q9BSJ2 902 aa23.29■■□□□ 1.32
RITA1-201ENST00000548278 SSC5DA1L4H1 1573 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 RBBP6Q7Z6E9 1792 aaKnown RBP23.28■■□□□ 1.32
RITA1-201ENST00000548278 A0A1W2PQC6 194 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 CCP110O43303 1012 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 ARP10275 920 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 SETQ01105 290 aaPredicted RBP23.28■■□□□ 1.32
RITA1-201ENST00000548278 CYP4A11Q02928 519 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 LRRC63Q05C16 580 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 PABPC4Q13310 644 aaKnown RBP eCLIP23.28■■□□□ 1.32
RITA1-201ENST00000548278 MYOCDQ8IZQ8 938 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 KLRG1Q96E93 195 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 ZFP91Q96JP5 570 aaPredicted RBP23.28■■□□□ 1.32
RITA1-201ENST00000548278 RGL1Q9NZL6 768 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 POLR2AP24928 1970 aaKnown RBP23.28■■□□□ 1.32
RITA1-201ENST00000548278 TRIM14Q14142 442 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 MUM1L1Q5H9M0 696 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 CNGA4Q8IV77 575 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 KCTD17Q8N5Z5 321 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 MXRA8Q9BRK3 442 aa23.28■■□□□ 1.32
RITA1-201ENST00000548278 CACNB1Q02641 598 aaPredicted RBP23.27■■□□□ 1.32
RITA1-201ENST00000548278 CCDC51Q96ER9 411 aa23.27■■□□□ 1.32
RITA1-201ENST00000548278 FGFBP2Q9BYJ0 223 aa23.27■■□□□ 1.32
RITA1-201ENST00000548278 ZHX2Q9Y6X8 837 aa23.27■■□□□ 1.32
RITA1-201ENST00000548278 RLFQ13129 1914 aa23.27■■□□□ 1.32
RITA1-201ENST00000548278 VWA5AO00534 786 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 GAS7O60861 476 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 ZBED4O75132 1171 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 FDX1P10109 184 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 FECHP22830 423 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 DNM2P50570 870 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 GIT2Q14161 759 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 SYTL5Q8TDW5 730 aaPredicted RBP23.26■■□□□ 1.31
RITA1-201ENST00000548278 C12orf42Q96LP6 360 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 ZNF577Q9BSK1 485 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 TUFT1Q9NNX1 390 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 MAP3K20Q9NYL2 800 aaKnown RBP23.26■■□□□ 1.31
RITA1-201ENST00000548278 PNMA2Q9UL42 364 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 PAXBP1Q9Y5B6 917 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 B4DLN1 442 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 RNF225M0QZC1 329 aaPredicted RBP23.26■■□□□ 1.31
RITA1-201ENST00000548278 KIF2AO00139 706 aaPredicted RBP23.26■■□□□ 1.31
RITA1-201ENST00000548278 KRT18P05783 430 aaKnown RBP23.26■■□□□ 1.31
RITA1-201ENST00000548278 TPM1P09493 284 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 ITGB5P18084 799 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 RAD51AP2Q09MP3 1159 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 ZCWPW2Q504Y3 356 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 HERC4Q5GLZ8 1057 aaPredicted RBP23.26■■□□□ 1.31
RITA1-201ENST00000548278 B3GNT9Q6UX72 402 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 REXO1L1PQ8IX06 675 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 SAMD3Q8N6K7 520 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 IL31RAQ8NI17 732 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 NAA15Q9BXJ9 866 aaKnown RBP23.26■■□□□ 1.31
RITA1-201ENST00000548278 FHDC1Q9C0D6 1143 aaPredicted RBP23.26■■□□□ 1.31
RITA1-201ENST00000548278 HOMER2Q9NSB8 354 aa23.26■■□□□ 1.31
RITA1-201ENST00000548278 RIOK3O14730 519 aaKnown RBP23.25■■□□□ 1.31
RITA1-201ENST00000548278 SLITRK3O94933 977 aa23.25■■□□□ 1.31
RITA1-201ENST00000548278 EYA4O95677 639 aa23.25■■□□□ 1.31
RITA1-201ENST00000548278 MIIPQ5JXC2 388 aa23.25■■□□□ 1.31
RITA1-201ENST00000548278 LRRC55Q6ZSA7 311 aa23.25■■□□□ 1.31
RITA1-201ENST00000548278 ATG4CQ96DT6 458 aa23.25■■□□□ 1.31
RITA1-201ENST00000548278 WNK4Q96J92 1243 aa23.25■■□□□ 1.31
RITA1-201ENST00000548278 TBC1D7Q9P0N9 293 aa23.25■■□□□ 1.31
RITA1-201ENST00000548278 PPP2R2CQ9Y2T4 447 aa23.25■■□□□ 1.31
RITA1-201ENST00000548278 NKRFO15226 690 aaKnown RBP eCLIP23.24■■□□□ 1.31
RITA1-201ENST00000548278 BCRP11274 1271 aa23.24■■□□□ 1.31
RITA1-201ENST00000548278 GTF2F1P35269 517 aaKnown RBP eCLIP23.24■■□□□ 1.31
RITA1-201ENST00000548278 MTIF2P46199 727 aaKnown RBP23.24■■□□□ 1.31
RITA1-201ENST00000548278 TOGARAM2Q6ZUX3 1019 aa23.24■■□□□ 1.31
RITA1-201ENST00000548278 KRT26Q7Z3Y9 468 aa23.24■■□□□ 1.31
RITA1-201ENST00000548278 WDR11Q9BZH6 1224 aa23.24■■□□□ 1.31
RITA1-201ENST00000548278 CTDP1Q9Y5B0 961 aaPredicted RBP23.24■■□□□ 1.31
RITA1-201ENST00000548278 FRMPD4Q14CM0 1322 aa23.24■■□□□ 1.31
RITA1-201ENST00000548278 C19orf81C9J6K1 198 aa23.24■■□□□ 1.31
RITA1-201ENST00000548278 IPO5O00410 1097 aaKnown RBP23.24■■□□□ 1.31
RITA1-201ENST00000548278 PES1O00541 588 aaKnown RBP23.24■■□□□ 1.31
RITA1-201ENST00000548278 ZSCAN12O43309 604 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms