RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 C11orf74Q86VG3 221 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 OSTM1Q86WC4 334 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 PTRH1Q86Y79 214 aaKnown RBP8.49□□□□□ -1.05
NPAS3-204ENST00000546849 TRIM48Q8IWZ4 208 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 PHOSPHO1Q8TCT1 267 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 FAM168AQ92567 244 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 PUS7Q96PZ0 661 aaKnown RBP8.49□□□□□ -1.05
NPAS3-204ENST00000546849 MYOTQ9UBF9 498 aa8.49□□□□□ -1.05
NPAS3-204ENST00000546849 SLC12A8A0AV02 714 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 NKRFO15226 690 aaKnown RBP eCLIP8.48□□□□□ -1.05
NPAS3-204ENST00000546849 ZBTB7AO95365 584 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 KCNA6P17658 529 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 ZC3H14Q6PJT7 736 aaKnown RBP8.48□□□□□ -1.05
NPAS3-204ENST00000546849 OVCH1Q7RTY7 1134 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 KIF18BQ86Y91 864 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 IRF2BP1Q8IU81 584 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 DDX11Q96FC9 970 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 TTC1Q99614 292 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 BOCQ9BWV1 1114 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 SMOC1Q9H4F8 434 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 PALD1Q9ULE6 856 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 SIT1Q9Y3P8 196 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 ATP23Q9Y6H3 246 aa8.48□□□□□ -1.05
NPAS3-204ENST00000546849 PTPDC1A2A3K4 754 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 H7C1D1 291 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 SLC27A2O14975 620 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 JUNBP17275 347 aaPredicted RBP8.47□□□□□ -1.05
NPAS3-204ENST00000546849 JAM2P57087 298 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 SLC9A5Q14940 896 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 DHCR24Q15392 516 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 FIGNQ5HY92 759 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 EMC4Q5J8M3 183 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 RPTNQ6XPR3 784 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 UHMK1Q8TAS1 419 aaKnown RBP8.47□□□□□ -1.05
NPAS3-204ENST00000546849 GPATCH3Q96I76 525 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 CD244Q9BZW8 370 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 PCIF1Q9H4Z3 704 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 ZNF652Q9Y2D9 606 aa8.47□□□□□ -1.05
NPAS3-204ENST00000546849 KRTAP4-8A0A0G2JLE6 195 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 KCNK3O14649 394 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 MAPKAPK2P49137 400 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 LACTBP83111 547 aaPredicted RBP8.46□□□□□ -1.06
NPAS3-204ENST00000546849 IRF9Q00978 393 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 ZNF174Q15697 407 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 SEPT7Q16181 437 aaKnown RBP8.46□□□□□ -1.06
NPAS3-204ENST00000546849 NXPE1Q8N323 547 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 GPR101Q96P66 508 aaPredicted RBP8.46□□□□□ -1.06
NPAS3-204ENST00000546849 MTFR1LQ9H019 292 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 IFT22Q9H7X7 185 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 THG1LQ9NWX6 298 aaKnown RBP8.46□□□□□ -1.06
NPAS3-204ENST00000546849 B4GALT6Q9UBX8 382 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 SRPK3Q9UPE1 567 aa8.46□□□□□ -1.06
NPAS3-204ENST00000546849 ZNF891A8MT65 544 aaPredicted RBP8.45□□□□□ -1.06
NPAS3-204ENST00000546849 ZNF561-AS1K7EIQ3 104 aa8.45□□□□□ -1.06
NPAS3-204ENST00000546849 SCDO00767 359 aa8.45□□□□□ -1.06
NPAS3-204ENST00000546849 BRINP1O60477 761 aa8.45□□□□□ -1.06
NPAS3-204ENST00000546849 KPNA1P52294 538 aaPredicted RBP8.45□□□□□ -1.06
NPAS3-204ENST00000546849 PRR5P85299 388 aa8.45□□□□□ -1.06
NPAS3-204ENST00000546849 PLEKHN1Q494U1 663 aaPredicted RBP8.45□□□□□ -1.06
NPAS3-204ENST00000546849 KCTD1Q719H9 257 aa8.45□□□□□ -1.06
NPAS3-204ENST00000546849 TMC6Q7Z403 805 aa8.45□□□□□ -1.06
NPAS3-204ENST00000546849 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.45□□□□□ -1.06
NPAS3-204ENST00000546849 PASD1Q8IV76 773 aa8.45□□□□□ -1.06
NPAS3-204ENST00000546849 ALG3Q92685 438 aa8.45□□□□□ -1.06
NPAS3-204ENST00000546849 ATP8A1Q9Y2Q0 1164 aa8.45□□□□□ -1.06
NPAS3-204ENST00000546849 F2P00734 622 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 HSP90B1P14625 803 aaKnown RBP8.44□□□□□ -1.06
NPAS3-204ENST00000546849 YBX3P16989 372 aaKnown RBP eCLIP8.44□□□□□ -1.06
NPAS3-204ENST00000546849 AMPD3Q01432 767 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 TUSC3Q13454 348 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 SKOR2Q2VWA4 1001 aaPredicted RBP8.44□□□□□ -1.06
NPAS3-204ENST00000546849 HABP4Q5JVS0 413 aaKnown RBP8.44□□□□□ -1.06
NPAS3-204ENST00000546849 ZNF605Q86T29 641 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 AFAP1L2Q8N4X5 818 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 ORAI3Q9BRQ5 295 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 EPB41L4BQ9H329 900 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 SMURF1Q9HCE7 757 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 RIC8BQ9NVN3 520 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 FAM53CQ9NYF3 392 aa8.44□□□□□ -1.06
NPAS3-204ENST00000546849 APOBEC2Q9Y235 224 aaKnown RBP8.44□□□□□ -1.06
NPAS3-204ENST00000546849 FAM83GA6ND36 823 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 TRAF5O00463 557 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 MAN2B1O00754 1011 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 SGSM2O43147 1006 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 PAPLNO95428 1278 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 GJA4P35212 333 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 TMEM132EQ6IEE7 984 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 HHIPL2Q6UWX4 724 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 TSPAN17Q96FV3 270 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 DIRC2Q96SL1 478 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 NSUN3Q9H649 340 aaKnown RBP8.43□□□□□ -1.06
NPAS3-204ENST00000546849 SIRT5Q9NXA8 310 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 ASH2LQ9UBL3 628 aa8.43□□□□□ -1.06
NPAS3-204ENST00000546849 PRAMEF25A6NGN4 478 aa8.42□□□□□ -1.06
NPAS3-204ENST00000546849 TADA3O75528 432 aa8.42□□□□□ -1.06
NPAS3-204ENST00000546849 AMY2AP04746 511 aa8.42□□□□□ -1.06
NPAS3-204ENST00000546849 AMY2BP19961 511 aa8.42□□□□□ -1.06
NPAS3-204ENST00000546849 GRIN1Q05586 938 aa8.42□□□□□ -1.06
NPAS3-204ENST00000546849 BTBD8Q5XKL5 378 aa8.42□□□□□ -1.06
NPAS3-204ENST00000546849 STRA8Q7Z7C7 330 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms