RNA–Protein interactions for RNA: ENST00000546318.2

IFIT1-202, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

TSL 3 BASIC

Gene IFIT1, Length 4,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-202ENST00000546318 CRYGNQ8WXF5 182 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 EIF3CQ99613 913 aaKnown RBP7.26□□□□□ -1.25
IFIT1-202ENST00000546318 POLR3CQ9BUI4 534 aaPredicted RBP7.26□□□□□ -1.25
IFIT1-202ENST00000546318 EDEM3Q9BZQ6 932 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 LUC7LQ9NQ29 371 aaKnown RBP7.26□□□□□ -1.25
IFIT1-202ENST00000546318 ZNRF3Q9ULT6 936 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 GAP43P17677 238 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 STAT3P40763 770 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 SLC12A3P55017 1021 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 HERC4Q5GLZ8 1057 aaPredicted RBP7.26□□□□□ -1.25
IFIT1-202ENST00000546318 IQCEQ6IPM2 695 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 LRRC55Q6ZSA7 311 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 SPICE1Q8N0Z3 855 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 KRT222Q8N1A0 295 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 ZHX3Q9H4I2 956 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 TUFT1Q9NNX1 390 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 DDX41Q9UJV9 622 aaKnown RBP7.26□□□□□ -1.25
IFIT1-202ENST00000546318 GUCA1BQ9UMX6 200 aa7.26□□□□□ -1.25
IFIT1-202ENST00000546318 POTEFA5A3E0 1075 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 POTEIP0CG38 1075 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 SLURP2P0DP57 97 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 MUTP22033 750 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 LRRC41Q15345 812 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 EDRF1Q3B7T1 1238 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CCDC174Q6PII3 467 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 POTEGQ6S5H5 508 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 POTEEQ6S8J3 1075 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 SMAP1Q8IYB5 467 aaPredicted RBP7.25□□□□□ -1.25
IFIT1-202ENST00000546318 SLC16A10Q8TF71 515 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 GJA10Q969M2 543 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CCDC42Q96M95 316 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 ZNF277Q9NRM2 450 aaPredicted RBP7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CNTNAP1P78357 1384 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CTAGE15A4D2H0 777 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 MED24O75448 989 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CTAGE8P0CG41 777 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CYP11B2P19099 503 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 HOXA13P31271 388 aaPredicted RBP7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CKAP4Q07065 602 aaKnown RBP7.25□□□□□ -1.25
IFIT1-202ENST00000546318 TNFAIP1Q13829 316 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 TNIP1Q15025 636 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 STXBP4Q6ZWJ1 553 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CTAGE6Q86UF2 777 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CATSPER3Q86XQ3 398 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CTAGE4Q8IX94 777 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 VCPKMTQ9H867 229 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 MMRN2Q9H8L6 949 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CEP72Q9P209 647 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 FRMD3A2A2Y4 597 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 FAM86B1E9PN63 330 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 FANCGO15287 622 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 MSH4O15457 936 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 ATP8B1O43520 1251 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 FAM86B2P0C5J1 330 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 VAV2P52735 878 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CBX1P83916 185 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 KRT26Q7Z3Y9 468 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 SYT2Q8N9I0 419 aaPredicted RBP7.25□□□□□ -1.25
IFIT1-202ENST00000546318 LRRN4CLQ8ND94 238 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 FBXO41Q8TF61 875 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 ALS2CR12Q96Q35 445 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 EMILIN3Q9NT22 766 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 PNMA2Q9UL42 364 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 SIK3Q9Y2K2 1263 aa7.25□□□□□ -1.25
IFIT1-202ENST00000546318 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.25□□□□□ -1.25
IFIT1-202ENST00000546318 CETN3O15182 167 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 ERLIN1O75477 346 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 CFBP00751 764 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 ARHGAP25P42331 645 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 CLCN6P51797 869 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 MARSP56192 900 aaKnown RBP7.24□□□□□ -1.25
IFIT1-202ENST00000546318 KIF5AQ12840 1032 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 ZCWPW2Q504Y3 356 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 RSRC2Q7L4I2 434 aaKnown RBP7.24□□□□□ -1.25
IFIT1-202ENST00000546318 CHP1Q99653 195 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 FAM207AQ9NSI2 230 aaPredicted RBP7.24□□□□□ -1.25
IFIT1-202ENST00000546318 GINM1Q9NU53 330 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 TBC1D7Q9P0N9 293 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 UBE4BO95155 1302 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 RNF225M0QZC1 329 aaPredicted RBP7.24□□□□□ -1.25
IFIT1-202ENST00000546318 EYA4O95677 639 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 TUBBP07437 444 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 ASNSP08243 561 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 DPEP1P16444 411 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 RPL13P26373 211 aaKnown RBP7.24□□□□□ -1.25
IFIT1-202ENST00000546318 CAP2P40123 477 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 KLK7P49862 253 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 HERVK_113P62684 666 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 SPIRE1Q08AE8 756 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 LRCH2Q5VUJ6 765 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 SECISBP2LQ93073 1101 aaKnown RBP7.24□□□□□ -1.25
IFIT1-202ENST00000546318 GMLQ99445 158 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 EIF2AK1Q9BQI3 630 aaKnown RBP7.24□□□□□ -1.25
IFIT1-202ENST00000546318 WDR11Q9BZH6 1224 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 VAV3Q9UKW4 847 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 MYO6Q9UM54 1294 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 RBBP6Q7Z6E9 1792 aaKnown RBP7.24□□□□□ -1.25
IFIT1-202ENST00000546318 SLC16A3O15427 465 aaKnown RBP7.24□□□□□ -1.25
IFIT1-202ENST00000546318 FAM13AO94988 1023 aa7.24□□□□□ -1.25
IFIT1-202ENST00000546318 MCM3P25205 808 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms