RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 HERVK_113P62684 666 aa16.34■□□□□ 0.21
RDX-218ENST00000544551 KCNB1Q14721 858 aa16.34■□□□□ 0.21
RDX-218ENST00000544551 DUSP9Q99956 384 aaKnown RBP16.34■□□□□ 0.21
RDX-218ENST00000544551 PODXL2Q9NZ53 605 aa16.34■□□□□ 0.21
RDX-218ENST00000544551 RCCD1A6NED2 376 aa16.33■□□□□ 0.21
RDX-218ENST00000544551 KCNH2Q12809 1159 aa16.33■□□□□ 0.21
RDX-218ENST00000544551 GRB10Q13322 594 aa16.33■□□□□ 0.21
RDX-218ENST00000544551 DYDC1Q8WWB3 177 aa16.33■□□□□ 0.21
RDX-218ENST00000544551 QTRT2Q9H974 415 aaKnown RBP16.33■□□□□ 0.21
RDX-218ENST00000544551 JMJD4Q9H9V9 463 aa16.33■□□□□ 0.21
RDX-218ENST00000544551 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.33■□□□□ 0.21
RDX-218ENST00000544551 KCNQ5Q9NR82 932 aa16.33■□□□□ 0.21
RDX-218ENST00000544551 HDAC9Q9UKV0 1011 aa16.33■□□□□ 0.21
RDX-218ENST00000544551 LIG3P49916 1009 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 USP14P54578 494 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 SHROOM1Q2M3G4 852 aaPredicted RBP16.33■□□□□ 0.2
RDX-218ENST00000544551 ODR4Q5SWX8 454 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 BEND6Q5SZJ8 279 aaPredicted RBP16.33■□□□□ 0.2
RDX-218ENST00000544551 IRF2BP1Q8IU81 584 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 FAM178BQ8IXR5 827 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 PLCD3Q8N3E9 789 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 KIAA0895Q8NCT3 520 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 FAM71BQ8TC56 605 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.33■□□□□ 0.2
RDX-218ENST00000544551 GSTTP1A0A1W2PQM5 241 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 LRRIQ3A6PVS8 624 aaPredicted RBP16.33■□□□□ 0.2
RDX-218ENST00000544551 F5H6K3 240 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 EPHB6O15197 1021 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 KLRC3Q07444 240 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 WDR78Q5VTH9 848 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 DMGDHQ9UI17 866 aaKnown RBP16.33■□□□□ 0.2
RDX-218ENST00000544551 RABGAP1Q9Y3P9 1069 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 PCDHAC2Q9Y5I4 1007 aa16.33■□□□□ 0.2
RDX-218ENST00000544551 KRIT1O00522 736 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 ATP8B1O43520 1251 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 CYP2C19P33261 490 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 HDAC7Q8WUI4 952 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 OSBPL9Q96SU4 736 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
RDX-218ENST00000544551 CTTNBP2NLQ9P2B4 639 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 LMO7Q8WWI1 1683 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 RSRC2Q7L4I2 434 aaKnown RBP16.32■□□□□ 0.2
RDX-218ENST00000544551 SPATA4Q8NEY3 305 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 SELENOSQ9BQE4 189 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 CHD2O14647 1828 aaKnown RBP16.32■□□□□ 0.2
RDX-218ENST00000544551 H0YIN7 160 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 CRKP46108 304 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 ARHGAP4P98171 946 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 IFI16Q16666 785 aaKnown RBP16.32■□□□□ 0.2
RDX-218ENST00000544551 SH2D3CQ8N5H7 860 aa16.32■□□□□ 0.2
RDX-218ENST00000544551 CHORDC1Q9UHD1 332 aaPredicted RBP16.32■□□□□ 0.2
RDX-218ENST00000544551 DCCP43146 1447 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 SLC9A1P19634 815 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 STAT1P42224 750 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 VPS41P49754 854 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 A0A1W2PQC6 194 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 CALUO43852 315 aaPredicted RBP16.31■□□□□ 0.2
RDX-218ENST00000544551 FLOT1O75955 427 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 MYL1P05976 194 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 ZNF543Q08ER8 600 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 LRCH2Q5VUJ6 765 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 FAM212AQ96EL1 285 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 KDM4FA0A1W2PPD8 638 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 EIF3CLB5ME19 914 aaKnown RBP16.31■□□□□ 0.2
RDX-218ENST00000544551 ALAS1P13196 640 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 ARHGAP25P42331 645 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 SLC10A5Q5PT55 438 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 ALKBH5Q6P6C2 394 aaKnown RBP16.31■□□□□ 0.2
RDX-218ENST00000544551 ZFPM1Q8IX07 1006 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 LARGE2Q8N3Y3 721 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 GUF1Q8N442 669 aaKnown RBP16.31■□□□□ 0.2
RDX-218ENST00000544551 EIF3CQ99613 913 aaKnown RBP16.31■□□□□ 0.2
RDX-218ENST00000544551 GCNT4Q9P109 453 aa16.31■□□□□ 0.2
RDX-218ENST00000544551 H2AFZP0C0S5 128 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 H2AFVQ71UI9 128 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 TNFRSF25Q93038 417 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 EXOC4Q96A65 974 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 MRRFQ96E11 262 aaKnown RBP16.3■□□□□ 0.2
RDX-218ENST00000544551 MAGEF1Q9HAY2 307 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 RIC8AQ9NPQ8 531 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 DDX4Q9NQI0 724 aaKnown RBP16.3■□□□□ 0.2
RDX-218ENST00000544551 GPR75-ASB3A0A0A6YYF3 556 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 PDCLQ13371 301 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 GJB7Q6PEY0 223 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 STXBP4Q6ZWJ1 553 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 SPATA20Q8TB22 786 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 ARHGAP20Q9P2F6 1191 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 RRP15Q9Y3B9 282 aaKnown RBP16.3■□□□□ 0.2
RDX-218ENST00000544551 ITIH6Q6UXX5 1313 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 KDM3AQ9Y4C1 1321 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 BACH1O14867 736 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 NKRFO15226 690 aaKnown RBP eCLIP16.3■□□□□ 0.2
RDX-218ENST00000544551 TRIM49P0CI25 452 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 TRIM49CP0CI26 452 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 LRRC63Q05C16 580 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 CDC42EP5Q6NZY7 148 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 GBP6Q6ZN66 633 aa16.3■□□□□ 0.2
RDX-218ENST00000544551 C7orf25Q9BPX7 421 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms