RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 TOGARAM2Q6ZUX3 1019 aa15.98■□□□□ 0.15
VPS33A-209ENST00000544349 ELP3Q9H9T3 547 aa15.98■□□□□ 0.15
VPS33A-209ENST00000544349 ZNF214Q9UL59 606 aaPredicted RBP15.98■□□□□ 0.15
VPS33A-209ENST00000544349 RIPK3Q9Y572 518 aa15.98■□□□□ 0.15
VPS33A-209ENST00000544349 MEIS1O00470 390 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 ATP2A1O14983 1001 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 SLU7O95391 586 aaKnown RBP15.97■□□□□ 0.15
VPS33A-209ENST00000544349 RPS6P62753 249 aaKnown RBP15.97■□□□□ 0.15
VPS33A-209ENST00000544349 PPATQ06203 517 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 NR1I3Q14994 352 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 CDKAL1Q5VV42 579 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 MOB2Q70IA6 237 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 ERO1AQ96HE7 468 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 PRDM10Q9NQV6 1147 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 RNF146Q9NTX7 359 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 VAV3Q9UKW4 847 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 CTNND2Q9UQB3 1225 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 GDAQ9Y2T3 454 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 STK24Q9Y6E0 443 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 SPDYE16A6NNV3 312 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-209ENST00000544349 ASIC1P78348 528 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-209ENST00000544349 TMEM132BQ14DG7 1078 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 HAUS3Q68CZ6 603 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 NCAPH2Q6IBW4 605 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 SNRNP48Q6IEG0 339 aaKnown RBP15.97■□□□□ 0.15
VPS33A-209ENST00000544349 RNF207Q6ZRF8 634 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 PNMA8AQ86V59 439 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-209ENST00000544349 ERO1BQ86YB8 467 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 ERMNQ8TAM6 284 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 SLC5A5Q92911 643 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 ZFP91Q96JP5 570 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-209ENST00000544349 CLMNQ96JQ2 1002 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 BAG1Q99933 345 aaPredicted RBP15.97■□□□□ 0.15
VPS33A-209ENST00000544349 MXRA8Q9BRK3 442 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 KIAA1024Q9UPX6 916 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 PPP2R2CQ9Y2T4 447 aa15.97■□□□□ 0.15
VPS33A-209ENST00000544349 MYMKA6NI61 221 aa15.96■□□□□ 0.15
VPS33A-209ENST00000544349 ARHGAP6O43182 974 aa15.96■□□□□ 0.15
VPS33A-209ENST00000544349 MED24O75448 989 aa15.96■□□□□ 0.15
VPS33A-209ENST00000544349 ETF1P62495 437 aaKnown RBP15.96■□□□□ 0.15
VPS33A-209ENST00000544349 SETQ01105 290 aaPredicted RBP15.96■□□□□ 0.15
VPS33A-209ENST00000544349 SPATA1Q5VX52 437 aa15.96■□□□□ 0.15
VPS33A-209ENST00000544349 SLC30A10Q6XR72 485 aa15.96■□□□□ 0.15
VPS33A-209ENST00000544349 CCDC47Q96A33 483 aaKnown RBP15.96■□□□□ 0.15
VPS33A-209ENST00000544349 TAAR1Q96RJ0 339 aa15.96■□□□□ 0.15
VPS33A-209ENST00000544349 LRRC27Q9C0I9 530 aa15.96■□□□□ 0.15
VPS33A-209ENST00000544349 DNAI1Q9UI46 699 aa15.96■□□□□ 0.15
VPS33A-209ENST00000544349 FRMPD4Q14CM0 1322 aa15.96■□□□□ 0.15
VPS33A-209ENST00000544349 POTEB3A0JP26 581 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 SPDYE5A6NIY4 337 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 IRF6O14896 467 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 PSMD10O75832 226 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 ARP10275 920 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 PRCPP42785 496 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 TREML2Q5T2D2 321 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 POTEBQ6S5H4 581 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 NSMFQ6X4W1 530 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 OTOP1Q7RTM1 612 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 CATSPER3Q86XQ3 398 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 GIMAP8Q8ND71 665 aaPredicted RBP15.95■□□□□ 0.14
VPS33A-209ENST00000544349 OTUD5Q96G74 571 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 DESI2Q9BSY9 194 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 CGNQ9P2M7 1197 aaKnown RBP15.95■□□□□ 0.14
VPS33A-209ENST00000544349 PHLPP2Q6ZVD8 1323 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 A0A0G2JLL6 359 aaPredicted RBP15.95■□□□□ 0.14
VPS33A-209ENST00000544349 E9PMD0 336 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 RPA1P27694 616 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 PDE4DQ08499 809 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 MTF1Q14872 753 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 LRCH2Q5VUJ6 765 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 PCNX4Q63HM2 1172 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 CNNM4Q6P4Q7 775 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 PRRT2Q7Z6L0 340 aaPredicted RBP15.95■□□□□ 0.14
VPS33A-209ENST00000544349 IL31RAQ8NI17 732 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 TEX13BQ9BXU2 312 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 RWDD2AQ9UIY3 292 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 LOC285556D6RIA3 1793 aa15.95■□□□□ 0.14
VPS33A-209ENST00000544349 CXCL11O14625 94 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 SPATA31C1P0DKV0 1188 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 ITGB5P18084 799 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 PBX1P40424 430 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 PAK1Q13153 545 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 PPP2R5CQ13362 524 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 TKFCQ3LXA3 575 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 FBXO38Q6PIJ6 1188 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 ADSSL1Q8N142 457 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 ZNF577Q9BSK1 485 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 EXOC1Q9NV70 894 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 PVALEFA0A1B0GWK0 134 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 EML1O00423 815 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 CCP110O43303 1012 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 BCRP11274 1271 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 HOXA7P31268 230 aaPredicted RBP15.94■□□□□ 0.14
VPS33A-209ENST00000544349 BAATQ14032 418 aaPredicted RBP15.94■□□□□ 0.14
VPS33A-209ENST00000544349 PGM5Q15124 567 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 GADL1Q6ZQY3 521 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 UNC13DQ70J99 1090 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 NIPA1Q7RTP0 329 aa15.94■□□□□ 0.14
VPS33A-209ENST00000544349 ARMC9Q7Z3E5 817 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms