RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 RIN2Q8WYP3 895 aaPredicted RBP17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 DNAJC19Q96DA6 116 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 CCDC51Q96ER9 411 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 TTYH3Q9C0H2 523 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 RSPH14Q9UHP6 348 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 POLR2FP61218 127 aaKnown RBP17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 SLC7A5Q01650 507 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 CTTNQ14247 550 aaKnown RBP17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 ABCB5Q2M3G0 1257 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 TCERG1LQ5VWI1 586 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 RABGGTAQ92696 567 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 FUT8Q9BYC5 575 aa17.49■□□□□ 0.39
SNRNP70-203ENST00000544278 MYH7BA7E2Y1 1941 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 MEIS2O14770 477 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 ZNF76P36508 570 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 CT47A1Q5JQC4 288 aaPredicted RBP17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 SLC27A3Q5K4L6 730 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 CENPPQ6IPU0 288 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 COG1Q8WTW3 980 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 MASTLQ96GX5 879 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 RGL2O15211 777 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 ARHGAP4P98171 946 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 DACT2Q5SW24 774 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 RBM26Q5T8P6 1007 aaKnown RBP17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 NFRKBQ6P4R8 1299 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 MYOCDQ8IZQ8 938 aa17.48■□□□□ 0.39
SNRNP70-203ENST00000544278 SHTN1A0MZ66 631 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 TRIM66O15016 1216 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 PPIP5K2O43314 1243 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 ONECUT3O60422 494 aaPredicted RBP17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 FXR2P51116 673 aaKnown RBP eCLIP17.47■□□□□ 0.391e-9■□□□□ 10
SNRNP70-203ENST00000544278 DCAF17Q5H9S7 520 aaPredicted RBP17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 HDAC7Q8WUI4 952 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 LSM14BQ9BX40 385 aaKnown RBP17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 RAB34Q9BZG1 259 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 MAST2Q6P0Q8 1798 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 RAPGEF1Q13905 1077 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 LRRC55Q6ZSA7 311 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 CATSPER3Q86XQ3 398 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 IFIH1Q9BYX4 1025 aaKnown RBP17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 FEZ2Q9UHY8 353 aaPredicted RBP17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 ALDH1B1P30837 517 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 ZBED6P86452 979 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 GJB7Q6PEY0 223 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 BHMT2Q9H2M3 363 aa17.47■□□□□ 0.39
SNRNP70-203ENST00000544278 UBR3Q6ZT12 1888 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 YDJCA8MPS7 323 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 H0YIN7 160 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 EML1O00423 815 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 TUBB4AP04350 444 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 MYBP10242 640 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 KIF11P52732 1056 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 KCNMA1Q12791 1236 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 CCDC102AQ96A19 550 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 MS4A14Q96JA4 679 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 ZNF277Q9NRM2 450 aaPredicted RBP17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 PI4KBQ9UBF8 816 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 ESYT2A0FGR8 921 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 MYBL2P10244 700 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 AMPD2Q01433 879 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 TRIM14Q14142 442 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 ARSHQ5FYA8 562 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 FAM83BQ5T0W9 1011 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 SFR1Q86XK3 245 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 PACSIN1Q9BY11 444 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 RABEP2Q9H5N1 569 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 SIK3Q9Y2K2 1263 aa17.46■□□□□ 0.39
SNRNP70-203ENST00000544278 A0A1W2PQC6 194 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 CYLC1P35663 651 aaPredicted RBP17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 PDE6BP35913 854 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 SPA17Q15506 151 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 GPATCH4Q5T3I0 446 aaKnown RBP17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 RDH13Q8NBN7 331 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 HOMER2Q9NSB8 354 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 PPP1R1BQ9UD71 204 aaPredicted RBP17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 ZBTB21Q9ULJ3 1066 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 SAR1BQ9Y6B6 198 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 CYP11B2P19099 503 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 CASP4P49662 377 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 CLK2P49760 499 aaKnown RBP17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 KIF5AQ12840 1032 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 FAM133AQ8N9E0 248 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 SCFD1Q8WVM8 642 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 FZD1Q9UP38 647 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 SCN9AQ15858 1988 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 KLRG2A4D1S0 409 aaPredicted RBP17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 SPDYE3A6NKU9 549 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 EN1Q05925 392 aaPredicted RBP17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 FBXO11Q86XK2 927 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 TPH2Q8IWU9 490 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 CEP112Q8N8E3 955 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 ELMO3Q96BJ8 720 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 VPS18Q9P253 973 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 SWAP70Q9UH65 585 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 THSD7AQ9UPZ6 1657 aa17.45■□□□□ 0.38
SNRNP70-203ENST00000544278 FTCDO95954 541 aa17.44■□□□□ 0.38
SNRNP70-203ENST00000544278 ZC2HC1CQ53FD0 456 aaPredicted RBP17.44■□□□□ 0.38
SNRNP70-203ENST00000544278 HHIPL2Q6UWX4 724 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms