RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 PDE4DQ08499 809 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 QPCTQ16769 361 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 TAOK1Q7L7X3 1001 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 CCDC82Q8N4S0 544 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 ZFAND2BQ8WV99 257 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 ITFG2Q969R8 447 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 THOC1Q96FV9 657 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 NAP1L3Q99457 506 aaPredicted RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 HINFPQ9BQA5 517 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 SLC39A2Q9NP94 309 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 ANKIB1Q9P2G1 1089 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 ANAPC4Q9UJX5 808 aa5.47□□□□□ -1.53
LMO3-229ENST00000543721 BZW2Q9Y6E2 419 aaKnown RBP5.47□□□□□ -1.53
LMO3-229ENST00000543721 RGPD2P0DJD1 1756 aa5.46□□□□□ -1.53
LMO3-229ENST00000543721 MYH10P35580 1976 aa5.46□□□□□ -1.53
LMO3-229ENST00000543721 AFF2P51816 1311 aa5.46□□□□□ -1.53
LMO3-229ENST00000543721 ESYT3A0FGR9 886 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 FRMD3A2A2Y4 597 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 NCK2O43639 380 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 COBLO75128 1261 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 ATP5HO75947 161 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 SUN1O94901 812 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 MBD4O95243 580 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 AGTP01019 485 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 VIMP08670 466 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 MCM7P33993 719 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 SKIV2L2P42285 1042 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 USP11P51784 963 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 TCIRG1Q13488 830 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 SEC23AQ15436 765 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 CCDC152Q4G0S7 254 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 CCDC178Q5BJE1 867 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 C6orf118Q5T5N4 469 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 BTNL9Q6UXG8 535 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 APBB1IPQ7Z5R6 666 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 SYCE1Q8N0S2 351 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 LPIN2Q92539 896 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 MTMR8Q96EF0 704 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 DTNBP1Q96EV8 351 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 PSMB7Q99436 277 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 PAIP2Q9BPZ3 127 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 ISCA1Q9BUE6 129 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 RIC8AQ9NPQ8 531 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 PIH1D3Q9NQM4 214 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 ZFATQ9P243 1243 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 FBXL5Q9UKA1 691 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 DENND2AQ9ULE3 1009 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 PVALEFA0A1B0GWK0 134 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 LRRC53A6NM62 1247 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 GSG1L2A8MUP6 293 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 UBE2Q2LH0YL09 131 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 HIP1RO75146 1068 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 GNA14O95837 355 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 MMEP08473 750 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 NUDT17P0C025 328 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 SCG2P13521 617 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 TMOD1P28289 359 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 CNGA1P29973 690 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 PMS1P54277 932 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 SH3BGRP55822 239 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 CABP4P57796 275 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 ROR2Q01974 943 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 FUT2Q10981 343 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 ORC2Q13416 577 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 ZRSR2Q15696 482 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 SLC18A3Q16572 532 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 IFIT1BQ5T764 474 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 ANKRD40Q6AI12 368 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 CENPPQ6IPU0 288 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 LDHAL6AQ6ZMR3 332 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 NBPF5PQ86XG9 351 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 COL23A1Q86Y22 540 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 KLHL7Q8IXQ5 586 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 FBF1Q8TES7 1133 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 ZNF317Q96PQ6 595 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 TSC22D3Q99576 134 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.46□□□□□ -1.54
LMO3-229ENST00000543721 INTS9Q9NV88 658 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 SLC5A4Q9NY91 659 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 PARP2Q9UGN5 583 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 SETD1BQ9UPS6 1966 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 COL22A1Q8NFW1 1626 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 TNKSO95271 1327 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 FAM205CA6NFA0 338 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 FAM187AA6NFU0 413 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 A6NHS1 94 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 PHF20L1A8MW92 1017 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 F8VZ95 297 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 F8W031 263 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 STK25O00506 426 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 BUB1O43683 1085 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 PPFIA2O75334 1257 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 KIF4AO95239 1232 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 ATP2A2P16615 1042 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 ATP5DP30049 168 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 GCLCP48506 637 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 ERVK-9P63128 1117 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 MKRN3Q13064 507 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 PSMD2Q13200 908 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 LBRQ14739 615 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms