RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 USP17L11C9JVI0 530 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USP17L18D6R9N7 530 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USP17L22D6RA61 530 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USP17L17D6RBQ6 530 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USP17L19D6RCP7 530 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USP17L20D6RJB6 530 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USO1O60763 962 aaKnown RBP7.25□□□□□ -1.25
PTPRO-208ENST00000542557 CYP11B2P19099 503 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 SREBF1P36956 1147 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 ARHGAP4P98171 946 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 SPIRE1Q08AE8 756 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USP17L24Q0WX57 530 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 SMC1AQ14683 1233 aaKnown RBP7.25□□□□□ -1.25
PTPRO-208ENST00000542557 USP17L6PQ6QN14 398 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 BTNL9Q6UXG8 535 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 KIAA0825Q8IV33 1275 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 TXLNBQ8N3L3 684 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 TRIM58Q8NG06 486 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 SYN2Q92777 582 aaPredicted RBP7.25□□□□□ -1.25
PTPRO-208ENST00000542557 SECISBP2LQ93073 1101 aaKnown RBP7.25□□□□□ -1.25
PTPRO-208ENST00000542557 LACRTQ9GZZ8 138 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 ST7Q9NRC1 585 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 SLX4Q8IY92 1834 aa7.25□□□□□ -1.25
PTPRO-208ENST00000542557 POTEB3A0JP26 581 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 TARSL2A2RTX5 802 aaKnown RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 POTECB2RU33 542 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 F5H6K3 240 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ZNF263O14978 683 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 EPHB6O15197 1021 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 PJA2O43164 708 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 MCM3P25205 808 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 CIITAP33076 1130 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 KIF11P52732 1056 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 SLC12A3P55017 1021 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 KLRC3Q07444 240 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 EDRF1Q3B7T1 1238 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 SYDE2Q5VT97 1194 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 NCAPH2Q6IBW4 605 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 PDXDC1Q6P996 788 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 POTEBQ6S5H4 581 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ZNF771Q7L3S4 317 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 HDXQ7Z353 690 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 GPBP1Q86WP2 473 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 C2CD5Q86YS7 1000 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 GLIS3Q8NEA6 775 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ERMNQ8TAM6 284 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 FAM20AQ96MK3 541 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 SH2D4AQ9H788 454 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 MMRN2Q9H8L6 949 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 FAM207AQ9NSI2 230 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 CEP72Q9P209 647 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 FAM184BQ9ULE4 1060 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 L1RE1Q9UN81 338 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 KIAA1024Q9UPX6 916 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 KIF13BQ9NQT8 1826 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 LRRC53A6NM62 1247 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 E9PMD0 336 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 RBAK-RBAKDNI3L0D1 243 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 MAFGO15525 162 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 MED24O75448 989 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ZMYND10O75800 440 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 NDUFB10O96000 172 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 TFRCP02786 760 aaKnown RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 PRLRP16471 622 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 RPA1P27694 616 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 VSNL1P62760 191 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 TCP10Q12799 353 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 LRRC41Q15345 812 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ABCB5Q2M3G0 1257 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ZNF572Q7Z3I7 529 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 FBXO11Q86XK2 927 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 TRIM59Q8IWR1 403 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 NOA1Q8NC60 698 aaKnown RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 NEK11Q8NG66 645 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ZNF622Q969S3 477 aaKnown RBP eCLIP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 LENG9Q96B70 501 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 IFIH1Q9BYX4 1025 aaKnown RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 KCTD10Q9H3F6 313 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 KCNQ5Q9NR82 932 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 WDR70Q9NW82 654 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 JRKLQ9Y4A0 524 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 PCDHA13Q9Y5I0 950 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 FAM196BA6NMK8 535 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 PIK3CDO00329 1044 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 TRAF5O00463 557 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ENC1O14682 589 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 TACC1O75410 805 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 EIF3JO75822 258 aaKnown RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 SLURP2P0DP57 97 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 OAS2P29728 719 aaKnown RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 CACNB3P54284 484 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 USP14P54578 494 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ITIH3Q06033 890 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 KCNMA1Q12791 1236 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 TRAF1Q13077 416 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 GPS2Q13227 327 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 ASTE1Q2TB18 679 aaPredicted RBP7.24□□□□□ -1.25
PTPRO-208ENST00000542557 CCDC40Q4G0X9 1142 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 IQCEQ6IPM2 695 aa7.24□□□□□ -1.25
PTPRO-208ENST00000542557 SCFD1Q8WVM8 642 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms