RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 ELMSAN1Q6PJG2 1045 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 PI16Q6UXB8 463 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 MAML3Q96JK9 1138 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 GLT1D1Q96MS3 346 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 MMP19Q99542 508 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 EHD4Q9H223 541 aa9.65□□□□□ -0.86
CLPB-211ENST00000542555 FLOT1O75955 427 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 EPB42P16452 691 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 SSTR4P31391 388 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 COPB2P35606 906 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 EPHB4P54760 987 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 SHROOM1Q2M3G4 852 aaPredicted RBP9.64□□□□□ -0.87
CLPB-211ENST00000542555 ANKRD33Q7Z3H0 272 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 PCSK9Q8NBP7 692 aaKnown RBP9.64□□□□□ -0.87
CLPB-211ENST00000542555 ACER1Q8TDN7 264 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 MEGF10Q96KG7 1140 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.64□□□□□ -0.873e-7■■■■■ 35.2
CLPB-211ENST00000542555 PBX4Q9BYU1 374 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 FAM184BQ9ULE4 1060 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 KIAA1024Q9UPX6 916 aa9.64□□□□□ -0.87
CLPB-211ENST00000542555 RLFQ13129 1914 aa9.63□□□□□ -0.87
CLPB-211ENST00000542555 KRTAP4-8A0A0G2JLE6 195 aa9.63□□□□□ -0.87
CLPB-211ENST00000542555 M0R2N6 131 aa9.63□□□□□ -0.87
CLPB-211ENST00000542555 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
CLPB-211ENST00000542555 ITGB8P26012 769 aa9.63□□□□□ -0.87
CLPB-211ENST00000542555 IRAK1P51617 712 aa9.63□□□□□ -0.87
CLPB-211ENST00000542555 ACLYP53396 1101 aa9.63□□□□□ -0.87
CLPB-211ENST00000542555 FAAP100Q0VG06 881 aa9.63□□□□□ -0.87
CLPB-211ENST00000542555 TMED8Q6PL24 325 aaPredicted RBP9.63□□□□□ -0.87
CLPB-211ENST00000542555 TINF2Q9BSI4 451 aa9.63□□□□□ -0.87
CLPB-211ENST00000542555 FRRS1LQ9P0K9 344 aa9.63□□□□□ -0.87
CLPB-211ENST00000542555 CXXC1Q9P0U4 656 aaPredicted RBP9.63□□□□□ -0.87
CLPB-211ENST00000542555 NOB1Q9ULX3 412 aaKnown RBP9.63□□□□□ -0.87
CLPB-211ENST00000542555 DIS3Q9Y2L1 958 aaKnown RBP9.63□□□□□ -0.87
CLPB-211ENST00000542555 CTDP1Q9Y5B0 961 aaPredicted RBP9.63□□□□□ -0.87
CLPB-211ENST00000542555 ELP1O95163 1332 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 PALM3A6NDB9 673 aaPredicted RBP9.62□□□□□ -0.87
CLPB-211ENST00000542555 FGBP02675 491 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 FSTP19883 344 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 DYNLL1P63167 89 aaKnown RBP9.62□□□□□ -0.87
CLPB-211ENST00000542555 TMEM31Q5JXX7 168 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 TMEM240Q5SV17 173 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 ZNF365Q70YC5 407 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 AMOTL1Q8IY63 956 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 TSEN2Q8NCE0 465 aaKnown RBP9.62□□□□□ -0.87
CLPB-211ENST00000542555 HERVK_113Q902F9 699 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 DDX11Q96FC9 970 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 MEIS3Q99687 375 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
CLPB-211ENST00000542555 A0A0U1RQG5 324 aaPredicted RBP9.61□□□□□ -0.87
CLPB-211ENST00000542555 GRXCR1A8MXD5 290 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 IGHA2P01877 340 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 GNAI2P04899 355 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 C6orf222P0C671 652 aaPredicted RBP9.61□□□□□ -0.87
CLPB-211ENST00000542555 CSF2RAP15509 400 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 CLDN10P78369 228 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 MTX1Q13505 466 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 SEPT2Q15019 361 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 KCNA10Q16322 511 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 TMEM179Q6ZVK1 233 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 RPUSD2Q8IZ73 545 aaKnown RBP9.61□□□□□ -0.87
CLPB-211ENST00000542555 MSL3Q8N5Y2 521 aaKnown RBP9.61□□□□□ -0.87
CLPB-211ENST00000542555 MIGA1Q8NAN2 632 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 LPIN3Q9BQK8 851 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 CRNKL1Q9BZJ0 848 aaKnown RBP9.61□□□□□ -0.87
CLPB-211ENST00000542555 PPP1R12CQ9BZL4 782 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 NKX2-4Q9H2Z4 354 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 GPR108Q9NPR9 543 aa9.61□□□□□ -0.87
CLPB-211ENST00000542555 ZNF521Q96K83 1311 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 WDR46O15213 610 aaKnown RBP9.6□□□□□ -0.87
CLPB-211ENST00000542555 RAD21O60216 631 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 CYP2E1P05181 493 aaPredicted RBP9.6□□□□□ -0.87
CLPB-211ENST00000542555 CT47B1P0C2W7 299 aaPredicted RBP9.6□□□□□ -0.87
CLPB-211ENST00000542555 STAT3P40763 770 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 ZAP70P43403 619 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 TNNI3KQ59H18 835 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 PERM1Q5SV97 790 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 IER5Q5VY09 327 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 ADGRA1Q86SQ6 560 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 MAGEB6Q8N7X4 407 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 ATG4CQ96DT6 458 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 ZNF512BQ96KM6 892 aaPredicted RBP9.6□□□□□ -0.87
CLPB-211ENST00000542555 AKTIPQ9H8T0 292 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 IL23AQ9NPF7 189 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 MCM9Q9NXL9 1143 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 SWAP70Q9UH65 585 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 ZHX1Q9UKY1 873 aaPredicted RBP9.6□□□□□ -0.87
CLPB-211ENST00000542555 COG5Q9UP83 839 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 FPGT-TNNI3KV9GXZ4 949 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 ZNF236Q9UL36 1845 aa9.6□□□□□ -0.87
CLPB-211ENST00000542555 SYNGAP1Q96PV0 1343 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 SYNRGQ9UMZ2 1314 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 ARVCFO00192 962 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 IPO8O15397 1037 aaKnown RBP9.59□□□□□ -0.87
CLPB-211ENST00000542555 DUSP11O75319 330 aaKnown RBP9.59□□□□□ -0.87
CLPB-211ENST00000542555 PGK2P07205 417 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 ACRP10323 421 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 MCM6Q14566 821 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 RIOX2Q8IUF8 465 aa9.59□□□□□ -0.87
CLPB-211ENST00000542555 DBNDD2Q9BQY9 259 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms