RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 USP17L15C9J2P7 530 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 USP17L13C9JLJ4 530 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 USP17L11C9JVI0 530 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 USP17L18D6R9N7 530 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 USP17L22D6RA61 530 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 USP17L17D6RBQ6 530 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 USP17L19D6RCP7 530 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 GOLGA8KD6RF30 607 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 USP17L20D6RJB6 530 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 AKR1B1P15121 316 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 SEC24CP53992 1094 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 USP17L24Q0WX57 530 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 USP17L6PQ6QN14 398 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 CASKIN2Q8WXE0 1202 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 RNPC3Q96LT9 517 aaKnown RBP17.53■□□□□ 0.4
CACFD1-206ENST00000540581 SCN7AQ01118 1682 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 BACH1O14867 736 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 LDHCP07864 332 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 SNAP25P60880 206 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 FKBP3Q00688 224 aaKnown RBP17.53■□□□□ 0.4
CACFD1-206ENST00000540581 ZNF804AQ7Z570 1209 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 IFT20Q8IY31 132 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 RAB34Q9BZG1 259 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 BCAS3Q9H6U6 928 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 ZNF287Q9HBT7 754 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 STK17AQ9UEE5 414 aa17.53■□□□□ 0.4
CACFD1-206ENST00000540581 PVALEFA0A1B0GWK0 134 aa17.52■□□□□ 0.4
CACFD1-206ENST00000540581 TMCO5BA8MYB1 307 aa17.52■□□□□ 0.4
CACFD1-206ENST00000540581 RIMBP2O15034 1052 aa17.52■□□□□ 0.4
CACFD1-206ENST00000540581 ERLIN2O94905 339 aa17.52■□□□□ 0.4
CACFD1-206ENST00000540581 PPP1R2P41236 205 aa17.52■□□□□ 0.4
CACFD1-206ENST00000540581 LRRC63Q05C16 580 aa17.52■□□□□ 0.4
CACFD1-206ENST00000540581 ASTE1Q2TB18 679 aaPredicted RBP17.52■□□□□ 0.4
CACFD1-206ENST00000540581 TCERG1LQ5VWI1 586 aa17.52■□□□□ 0.4
CACFD1-206ENST00000540581 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.4
CACFD1-206ENST00000540581 PCDHA12Q9UN75 941 aa17.52■□□□□ 0.4
CACFD1-206ENST00000540581 ZNF233A6NK53 670 aa17.52■□□□□ 0.39
CACFD1-206ENST00000540581 TAL1P17542 331 aaPredicted RBP17.52■□□□□ 0.39
CACFD1-206ENST00000540581 GTF2A1P52655 376 aaPredicted RBP17.52■□□□□ 0.39
CACFD1-206ENST00000540581 GPSM2P81274 684 aa17.52■□□□□ 0.39
CACFD1-206ENST00000540581 DCAF17Q5H9S7 520 aaPredicted RBP17.52■□□□□ 0.39
CACFD1-206ENST00000540581 GPBP1Q86WP2 473 aa17.52■□□□□ 0.39
CACFD1-206ENST00000540581 KAT2BQ92831 832 aa17.52■□□□□ 0.39
CACFD1-206ENST00000540581 ARHGEF1Q92888 912 aaKnown RBP17.52■□□□□ 0.39
CACFD1-206ENST00000540581 NARFQ9UHQ1 456 aa17.52■□□□□ 0.39
CACFD1-206ENST00000540581 KIAA1551Q9HCM1 1747 aa17.52■□□□□ 0.39
CACFD1-206ENST00000540581 SNED1Q8TER0 1413 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 RAD51CO43502 376 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 CEP104O60308 925 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 SHOX2O60902 331 aaPredicted RBP17.51■□□□□ 0.39
CACFD1-206ENST00000540581 SLC9A1P19634 815 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 ADAM9Q13443 819 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 CEP85LQ5SZL2 805 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 EMBQ6PCB8 327 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 HAS1Q92839 578 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 USP17L10C9JJH3 530 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 PPP1R11O60927 126 aaPredicted RBP17.51■□□□□ 0.39
CACFD1-206ENST00000540581 EFCAB13Q8IY85 973 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 DNAJC19Q96DA6 116 aa17.51■□□□□ 0.39
CACFD1-206ENST00000540581 FAM196BA6NMK8 535 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 SERPING1P05155 500 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 IBSPP21815 317 aaPredicted RBP17.5■□□□□ 0.39
CACFD1-206ENST00000540581 ASIC2Q16515 512 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 ADGRF4Q8IZF3 695 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 SPAG5Q96R06 1193 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 MXD3Q9BW11 206 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 CD209Q9NNX6 404 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
CACFD1-206ENST00000540581 ATP6V0A2Q9Y487 856 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 LCA5LO95447 670 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 PRLRP16471 622 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 FXR2P51116 673 aaKnown RBP eCLIP17.5■□□□□ 0.39
CACFD1-206ENST00000540581 CASP5P51878 434 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 RNF187Q5TA31 235 aaPredicted RBP17.5■□□□□ 0.39
CACFD1-206ENST00000540581 SLC30A10Q6XR72 485 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 TAF4BQ92750 862 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 CEP72Q9P209 647 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 A0A087WUV0 522 aaPredicted RBP17.5■□□□□ 0.39
CACFD1-206ENST00000540581 POTEFA5A3E0 1075 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 C6orf229H3BNL8 230 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 POTEIP0CG38 1075 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 POTEGQ6S5H5 508 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 POTEEQ6S8J3 1075 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 ADAT2Q7Z6V5 191 aaKnown RBP17.5■□□□□ 0.39
CACFD1-206ENST00000540581 SH3GL2Q99962 352 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 TRIM31Q9BZY9 425 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 IKZF4Q9H2S9 585 aa17.5■□□□□ 0.39
CACFD1-206ENST00000540581 PPANQ9NQ55 473 aaKnown RBP17.5■□□□□ 0.39
CACFD1-206ENST00000540581 ROBO1Q9Y6N7 1651 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 GRID2IPA4D2P6 1211 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 INPP5BP32019 993 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 PAK2Q13177 524 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 NAA35Q5VZE5 725 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 GJB7Q6PEY0 223 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 JMJD4Q9H9V9 463 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 RTCBQ9Y3I0 505 aaKnown RBP17.49■□□□□ 0.39
CACFD1-206ENST00000540581 PJA2O43164 708 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 PLA2G4BP0C869 781 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 PPP4CP60510 307 aa17.49■□□□□ 0.39
CACFD1-206ENST00000540581 PTK2Q05397 1052 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms