RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 FBXO11Q86XK2 927 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 CSRNP1Q96S65 589 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 MMS19Q96T76 1030 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 ZCCHC17Q9NP64 241 aaKnown RBP13.73□□□□□ -0.21
USP10-202ENST00000540269 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
USP10-202ENST00000540269 ATRNL1Q5VV63 1379 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 ZNF185O15231 689 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 C21orf2O43822 256 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 NOL4O94818 638 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 HNRNPH3P31942 346 aaKnown RBP13.73□□□□□ -0.21
USP10-202ENST00000540269 EIF4A3P38919 411 aaKnown RBP13.73□□□□□ -0.21
USP10-202ENST00000540269 VSNL1P62760 191 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 PSMD2Q13200 908 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 PABPC4Q13310 644 aaKnown RBP eCLIP13.73□□□□□ -0.213e-13■■■■□ 21.1
USP10-202ENST00000540269 LONRF2Q1L5Z9 754 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 HERC4Q5GLZ8 1057 aaPredicted RBP13.73□□□□□ -0.21
USP10-202ENST00000540269 UTP14CQ5TAP6 766 aaKnown RBP13.73□□□□□ -0.21
USP10-202ENST00000540269 RRAGAQ7L523 313 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 MSANTD4Q8NCY6 345 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 GMCL1P1Q8NEA9 526 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 FLAD1Q8NFF5 587 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 GMCL1Q96IK5 515 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 UBXN6Q9BZV1 441 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 KCTD10Q9H3F6 313 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 MLXIPQ9HAP2 919 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 UTRNP46939 3433 aa13.73□□□□□ -0.21
USP10-202ENST00000540269 PDE2AO00408 941 aaPredicted RBP13.72□□□□□ -0.21
USP10-202ENST00000540269 BMP3P12645 472 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 HOXD13P35453 343 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
USP10-202ENST00000540269 WHAMMP3Q1A5X7 153 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 PURBQ96QR8 312 aaKnown RBP13.72□□□□□ -0.21
USP10-202ENST00000540269 CRACR2AQ9BSW2 395 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 GTPBP4Q9BZE4 634 aaKnown RBP13.72□□□□□ -0.21
USP10-202ENST00000540269 ZNHIT6Q9NWK9 470 aaKnown RBP13.72□□□□□ -0.21
USP10-202ENST00000540269 SALL4Q9UJQ4 1053 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 EML1O00423 815 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 MSH4O15457 936 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 NPM3O75607 178 aaKnown RBP13.72□□□□□ -0.21
USP10-202ENST00000540269 KRT83P78385 493 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 CYP4A11Q02928 519 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 GABPB1Q06547 395 aaPredicted RBP13.72□□□□□ -0.21
USP10-202ENST00000540269 CCDC170Q8IYT3 715 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 CAPZA3Q96KX2 299 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 NT5C3AQ9H0P0 336 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 ZHX3Q9H4I2 956 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 NLRC4Q9NPP4 1024 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 PRR12Q9ULL5 1215 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 CAPN6Q9Y6Q1 641 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 KDM3AQ9Y4C1 1321 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 COL4A5P29400 1685 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 RSPH10B2B2RC85 870 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 PPIP5K2O43314 1243 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 TLR2O60603 784 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 RSPH10BP0C881 870 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 MMP14P50281 582 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 CDK17Q00537 523 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 TANGO6Q9C0B7 1094 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 ARFGAP3Q9NP61 516 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 RAB21Q9UL25 225 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 COL4A3BPQ9Y5P4 624 aa13.72□□□□□ -0.21
USP10-202ENST00000540269 FRMD3A2A2Y4 597 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 CTAGE15A4D2H0 777 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 CTAGE8P0CG41 777 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 SREBF1P36956 1147 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 KIF11P52732 1056 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 VAV2P52735 878 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 FKBP3Q00688 224 aaKnown RBP13.71□□□□□ -0.21
USP10-202ENST00000540269 AP3B2Q13367 1082 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 BEND6Q5SZJ8 279 aaPredicted RBP13.71□□□□□ -0.21
USP10-202ENST00000540269 PAPD7Q5XG87 772 aaKnown RBP13.71□□□□□ -0.21
USP10-202ENST00000540269 HGSNATQ68CP4 663 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 ZNF662Q6ZS27 426 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 CTAGE6Q86UF2 777 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 CTAGE4Q8IX94 777 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 CCDC42Q96M95 316 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 IKZF4Q9H2S9 585 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 ABCB6Q9NP58 842 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 VAV3Q9UKW4 847 aa13.71□□□□□ -0.21
USP10-202ENST00000540269 CCDC151A5D8V7 595 aa13.71□□□□□ -0.22
USP10-202ENST00000540269 RAD17O75943 681 aa13.71□□□□□ -0.22
USP10-202ENST00000540269 GIT2Q14161 759 aa13.71□□□□□ -0.22
USP10-202ENST00000540269 RBM26Q5T8P6 1007 aaKnown RBP13.71□□□□□ -0.22
USP10-202ENST00000540269 CCDC84Q86UT8 332 aaPredicted RBP13.71□□□□□ -0.22
USP10-202ENST00000540269 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.22
USP10-202ENST00000540269 RGL1Q9NZL6 768 aa13.71□□□□□ -0.22
USP10-202ENST00000540269 ZBTB12Q9Y330 459 aaPredicted RBP13.71□□□□□ -0.22
USP10-202ENST00000540269 ABCB11O95342 1321 aa13.71□□□□□ -0.22
USP10-202ENST00000540269 ZBTB39O15060 712 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 POLR3GO15318 223 aaPredicted RBP13.7□□□□□ -0.22
USP10-202ENST00000540269 ENTPD3O75355 529 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 UBXN2AP68543 259 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 Q4G0T1 1027 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 PDXDC1Q6P996 788 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 BTNL9Q6UXG8 535 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 ANKRD13CQ8N6S4 541 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 TSG101Q99816 390 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 REEP2Q9BRK0 252 aa13.7□□□□□ -0.22
USP10-202ENST00000540269 EMILIN3Q9NT22 766 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms