RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 PRKAB2O43741 272 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 PEX14O75381 377 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 BAG2O95816 211 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 MYBL1P10243 752 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 ERCC5P28715 1186 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-214ENST00000540109 SFSWAPQ12872 951 aaKnown RBP6.61□□□□□ -1.35
PTPRD-214ENST00000540109 C12orf60Q5U649 245 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 PRR5LQ6MZQ0 368 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CYP26C1Q6V0L0 522 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 MGARPQ8TDB4 240 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 NAV1Q8NEY1 1877 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 GOLGA8QA0A0J9YX86 632 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 GOLGA8OA6NCC3 632 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 RASSF10A6NK89 507 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 USP17L12C9JPN9 530 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 USP17L21D6R901 530 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 GOLGA8NF8WBI6 632 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CTIFO43310 598 aaKnown RBP6.61□□□□□ -1.35
PTPRD-214ENST00000540109 GSTA2P09210 222 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 SCG2P13521 617 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 EEF2P13639 858 aaKnown RBP6.61□□□□□ -1.35
PTPRD-214ENST00000540109 LMNB1P20700 586 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 ICA1Q05084 483 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CC2D2BQ6DHV5 1058 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 PPP1R14BQ96C90 147 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 CUEDC2Q9H467 287 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 FGFR1OP2Q9NVK5 253 aa6.61□□□□□ -1.35
PTPRD-214ENST00000540109 A0A0G2JLW4 131 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 ARHGAP10A1A4S6 786 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 SERPINB2P05120 415 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 NDUFA8P51970 172 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 DMPKQ09013 629 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 PFKFB3Q16875 520 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 ZNF772Q68DY9 489 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 SRGAP1Q7Z6B7 1085 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 MTRQ99707 1265 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 MKNK2Q9HBH9 465 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 GPHNQ9NQX3 736 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 POLE3Q9NRF9 147 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 SRP68Q9UHB9 627 aaKnown RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 PPP2R2CQ9Y2T4 447 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 GPR75-ASB3A0A0A6YYF3 556 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 TMEM110-MUSTN1A8MSY1 372 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 KIF28PB7ZC32 967 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 TMEM232C9JQI7 657 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 NPR1P16066 1061 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 TRIM21P19474 475 aaKnown RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 CCT6AP40227 531 aaKnown RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 TROAPQ12815 778 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 COL9A3Q14050 684 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 ARID5BQ14865 1188 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 NT5DC1Q5TFE4 455 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 OLFML1Q6UWY5 402 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 MAP7D3Q8IWC1 876 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 TRIM42Q8IWZ5 723 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 MRIQ9BWK5 157 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 OSBPL5Q9H0X9 879 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 MCM9Q9NXL9 1143 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 CDC23Q9UJX2 597 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 GAKO14976 1311 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 ADKP55263 362 aaKnown RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 STX17P56962 302 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 MRPS35P82673 323 aaKnown RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 STXBP4Q6ZWJ1 553 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 KRT27Q7Z3Y8 459 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 KLHL23Q8NBE8 558 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 TXLNGQ9NUQ3 528 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 SH3BP1Q9Y3L3 701 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 CCDC169A6NNP5 214 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 ATP2A2P16615 1042 aaKnown RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 LONP1P36776 959 aaKnown RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 PCYT1AP49585 367 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 VTI1AQ96AJ9 217 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 DYDC2Q96IM9 177 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 SPZ1Q9BXG8 430 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 CTDP1Q9Y5B0 961 aaPredicted RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 MYO5AQ9Y4I1 1855 aaKnown RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.6□□□□□ -1.35
PTPRD-214ENST00000540109 USP27XA6NNY8 438 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 UFL1O94874 794 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 GNA11P29992 359 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 GOLGA8FQ08AF8 430 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 GOLGA8DPQ0D2H9 430 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 PDCLQ13371 301 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 CCDC25Q86WR0 208 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 KSR1Q8IVT5 923 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 PHKBQ93100 1093 aa6.6□□□□□ -1.35
PTPRD-214ENST00000540109 QSER1Q2KHR3 1735 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 A0A1B0GVL5 298 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 SLC4A8Q2Y0W8 1093 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 OLFML2BQ68BL8 750 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 KRT25Q7Z3Z0 450 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 SIX5Q8N196 739 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 VPS52Q8N1B4 723 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 ZNF483Q8TF39 744 aaPredicted RBP6.59□□□□□ -1.35
PTPRD-214ENST00000540109 SDR42E1Q8WUS8 393 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 SGSM3Q96HU1 749 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 ZC4H2Q9NQZ6 224 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 MTMR7Q9Y216 660 aa6.59□□□□□ -1.35
PTPRD-214ENST00000540109 NUB1Q9Y5A7 615 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms