RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 CBFA2T2O43439 604 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 STX17P56962 302 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 HSP90AA4PQ58FG1 418 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 NCAPH2Q6IBW4 605 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 SV2BQ7L1I2 683 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 ANKRD13AQ8IZ07 590 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 IL31RAQ8NI17 732 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 ENOX1Q8TC92 643 aaKnown RBP19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 RAD54LQ92698 747 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 PURBQ96QR8 312 aaKnown RBP19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 TAAR1Q96RJ0 339 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 C7orf25Q9BPX7 421 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 RNF146Q9NTX7 359 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 RMND1Q9NWS8 449 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 DNAI1Q9UI46 699 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 SCN4AP35499 1836 aa19.05■□□□□ 0.64
PCDHB17P-201ENST00000539533 POTEB3A0JP26 581 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 SPDYE16A6NNV3 312 aaPredicted RBP19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 VGLL3A8MV65 326 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 SERPINC1P01008 464 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 ERCC5P28715 1186 aaPredicted RBP19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 BMS1Q14692 1282 aaKnown RBP19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 ZNF658Q5TYW1 1059 aaPredicted RBP19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 POTEBQ6S5H4 581 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 NSMFQ6X4W1 530 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 HOXC10Q9NYD6 342 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 VAV3Q9UKW4 847 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 KIAA1024Q9UPX6 916 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 MAPK8IP1Q9UQF2 711 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 NFE2L3Q9Y4A8 694 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 MED24O75448 989 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 ARP10275 920 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 ARHGAP29Q52LW3 1261 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 RNF207Q6ZRF8 634 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 TMX1Q9H3N1 280 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 CLEC11AQ9Y240 323 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 RPTORQ8N122 1335 aa19.04■□□□□ 0.64
PCDHB17P-201ENST00000539533 PTPRFP10586 1907 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 MYMKA6NI61 221 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 MEIS1O00470 390 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 COBLO75128 1261 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 CLCN6P51797 869 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 AMPD3Q01432 767 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 PPATQ06203 517 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 HYIQ5T013 277 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 PNMA8AQ86V59 439 aaPredicted RBP19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 ERO1BQ86YB8 467 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 ST7Q9NRC1 585 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 PNMA2Q9UL42 364 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 PEX10O60683 326 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 ITGB5P18084 799 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 ASIC1P78348 528 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 PDE4CQ08493 712 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 KCNB1Q14721 858 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 TRIM65Q6PJ69 517 aa19.03■□□□□ 0.64
PCDHB17P-201ENST00000539533 E9PMD0 336 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 EML1O00423 815 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 RHOBTB3O94955 611 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 OAZ1P54368 228 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 BAATQ14032 418 aaPredicted RBP19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 PLS1Q14651 629 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 MAP1SQ66K74 1059 aaPredicted RBP19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 POTEEQ6S8J3 1075 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 GADL1Q6ZQY3 521 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 DYMQ7RTS9 669 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 CATSPER3Q86XQ3 398 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 VSTM4Q8IW00 320 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 MXRA8Q9BRK3 442 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 NT5C3AQ9H0P0 336 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 MAP3K20Q9NYL2 800 aaKnown RBP19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 FHOD1Q9Y613 1164 aa19.02■□□□□ 0.64
PCDHB17P-201ENST00000539533 KDM3AQ9Y4C1 1321 aa19.02■□□□□ 0.63
PCDHB17P-201ENST00000539533 EIF2AK2P19525 551 aaKnown RBP19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 PRCPP42785 496 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 CT47A1Q5JQC4 288 aaPredicted RBP19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 LRCH2Q5VUJ6 765 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 OTOP1Q7RTM1 612 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 SLC5A5Q92911 643 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 SAMSN1Q9NSI8 373 aaKnown RBP19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 CTNND2Q9UQB3 1225 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 POTEFA5A3E0 1075 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 SPDYE5A6NIY4 337 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 ATP2A1O14983 1001 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 PSMD10O75832 226 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 SPATA31C1P0DKV0 1188 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 MRPS9P82933 396 aaKnown RBP19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 POTEGQ6S5H5 508 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 TEX13BQ9BXU2 312 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 SYNRGQ9UMZ2 1314 aa19.01■□□□□ 0.63
PCDHB17P-201ENST00000539533 A0A0G2JLL6 359 aaPredicted RBP19■□□□□ 0.63
PCDHB17P-201ENST00000539533 TRAF5O00463 557 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 PRRT2Q7Z6L0 340 aaPredicted RBP19■□□□□ 0.63
PCDHB17P-201ENST00000539533 REXO1L1PQ8IX06 675 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 RMDN3Q96TC7 470 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 ZNF577Q9BSK1 485 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 WDR11Q9BZH6 1224 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 MYPNQ86TC9 1320 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 CHMP2AO43633 222 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 PDE4DQ08499 809 aa19■□□□□ 0.63
PCDHB17P-201ENST00000539533 HAUS3Q68CZ6 603 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms